PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_024965076.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
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Family | B3 | ||||||||
Protein Properties | Length: 231aa MW: 26293.1 Da PI: 10.1369 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 49.3 | 8.7e-16 | 139 | 224 | 2 | 83 |
EEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEE.TTS-EEEEEE...EEETTEEEE-TTHHHHHHHHT--TT-EEEEE CS B3 2 fkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltled.esgrsWevkliy.rkksgryvltkGWkeFvkangLkegDfvvFk 83 +k lt+sdv +++r+ lpk+ aee+ ++++e++ ++++d s+++W++++++ +++gr++l + +Fvk n+L++gD + ++ XP_024965076.1 139 QKLLTHSDVKEQSRILLPKREAEENlpRLDSKEGIRIVMKDvVSNEEWKMQYRFwANQKGRMYLLDQSGDFVKKNKLEVGDQLKLY 224 799************************77778999******9999*******9855555667788899*************99887 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 231 aa Download sequence |
MENSNGFLSK TSKPCPDFPT QDSQKPYPCT SGMRNSESPV CLNLFPVAVS SIHPIQPLHI 60 PESGESKKLQ AKIARSNRKK AREMTTNKTI NPSISSSLSS PSSSIRSAII KSTKPHKSSD 120 QDHCIFYTPN KVKLSFVLQK LLTHSDVKEQ SRILLPKREA EENLPRLDSK EGIRIVMKDV 180 VSNEEWKMQY RFWANQKGRM YLLDQSGDFV KKNKLEVGDQ LKLYQDELRN L |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G28300.1 | 4e-31 | B3 family protein |