PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_024964792.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
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Family | NF-YB | ||||||||
Protein Properties | Length: 163aa MW: 17945.1 Da PI: 4.6858 | ||||||||
Description | NF-YB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YB | 39.7 | 1.2e-12 | 18 | 113 | 6 | 95 |
NF-YB 6 rflPianvsrimkkvlPa......nakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrele 94 +lP a v r++k l + + ++ kd+ e fi ++++ a+d c++ kr+tin++d++ al ++ f ++v++l++ l++++ + XP_024964792.1 18 DELPKAIVRRLVKDKLSQlsqdggEIQVLKDSLLAFSESSRIFIHYLSATANDICKESKRQTINAEDVFKALEEIEFPEFVASLRTSLEEFKRKN 112 5799999999999988752221113356788888999999*************************************************998765 PP NF-YB 95 g 95 + XP_024964792.1 113 A 113 5 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 163 aa Download sequence |
MVTAATPTAG EKVVADADEL PKAIVRRLVK DKLSQLSQDG GEIQVLKDSL LAFSESSRIF 60 IHYLSATAND ICKESKRQTI NAEDVFKALE EIEFPEFVAS LRTSLEEFKR KNAKRKSESA 120 KSKEAKKSKT EEPPMENGEA QENGEEDRND AATAAVVVVV DSE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G27470.1 | 9e-37 | NF-YB family protein |