PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_024964750.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
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Family | NF-YB | ||||||||
Protein Properties | Length: 237aa MW: 26915.8 Da PI: 6.1585 | ||||||||
Description | NF-YB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YB | 172.8 | 3.8e-54 | 74 | 168 | 1 | 95 |
NF-YB 1 vreqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyreleg 95 vreqdrf+Pianv+rim+k+lP +akis+daket+qecvse+isfvt+ea+d+cqre+rkti+++d+lwa+++lGf+dy+epl+vyl++yre++g XP_024964750.1 74 VREQDRFMPIANVIRIMRKILPPHAKISDDAKETIQECVSEYISFVTGEANDRCQREQRKTITAEDVLWAMSKLGFDDYIEPLTVYLHRYREFDG 168 69******************************************************************************************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 237 aa Download sequence |
MADLQVNQPE MMKAIIFMSL FFFFLIHISC NWFLPNRVTY LLRPGMQQQT DMKLKLPEMT 60 NTNNPSTDDN ECTVREQDRF MPIANVIRIM RKILPPHAKI SDDAKETIQE CVSEYISFVT 120 GEANDRCQRE QRKTITAEDV LWAMSKLGFD DYIEPLTVYL HRYREFDGGE RGSIRGEPLV 180 KRAADPGPYA FVPAAFHHHN GFFGPASIGG FFKDPSVAGP SGPTAVAGFE PYAHCKE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G47670.2 | 4e-68 | NF-YB family protein |