PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_024964693.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
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Family | bHLH | ||||||||
Protein Properties | Length: 197aa MW: 21985.4 Da PI: 8.8331 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 15.2 | 3.9e-05 | 22 | 69 | 1 | 52 |
CHHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIk 52 +r + erE+ R+++N+ f +L e l + Ka+iL +++++Ik XP_024964693.1 22 KRIHKAEREKMKREHLNELFLKLAEALEVgE-----QNSGKASILGETTRFIK 69 688899*********************9944.....56678889999999998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 197 aa Download sequence |
MGAKNSPTSL LPSKKNLGKV PKRIHKAERE KMKREHLNEL FLKLAEALEV GEQNSGKASI 60 LGETTRFIKV MLDQIKSLKK ENAALLSESQ YVKLEKNEIE DETCGLQIQI GELKRRLTVK 120 EEKKLDLNAP PIESQEQQCL MEDSPIVNPV FVFPACLNFQ GGGGDGDGGV VKAASNVRKP 180 HPRYPTSLDS WHFQLLP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G47640.2 | 3e-41 | bHLH family protein |