PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_024964484.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
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Family | bHLH | ||||||||
Protein Properties | Length: 297aa MW: 32423.4 Da PI: 5.007 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 31.4 | 3.3e-10 | 146 | 190 | 5 | 54 |
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 h+++Er RR+ri +++ L+el+P++ K +Ka++L + +Y+k L XP_024964484.1 146 HSIAERLRRERIAERMRALQELVPSC-----NKTDKAAMLDEILDYVKFL 190 99***********************8.....6****************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 297 aa Download sequence |
MATDPPEGYG DDFLEQILAI PSYNIAGCLP TGNTSDAAAS ETVSVHHQQQ QQSVFPLGLS 60 LDNGRETIGA FTGGQQQQQQ RERGGNMNMG GLFPPFENLQ SHSLLHTVPQ QAFQGQPTTS 120 TAVTVPHPPT IRPRVRARRG QATDPHSIAE RLRRERIAER MRALQELVPS CNKTDKAAML 180 DEILDYVKFL RLQVKVLSMS RLGGAGAVAQ LVSDVPLQSV EGDASENGYN QPAWENWSND 240 DTEREVAKLM EEDVGAAMQF LQSKALCIMP ISLASLIYPT HQPDTNSLVK PEPSAPS |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 151 | 156 | RLRRER |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G02590.3 | 7e-78 | bHLH family protein |