PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024964426.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family bHLH
Protein Properties Length: 266aa    MW: 29853.2 Da    PI: 6.939
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024964426.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH40.35.7e-1377129154
                     CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                     ++ +hn+ Er RR+r+N+ ++ Lr+llP +   ++kK+s   ++ +A +YI +L
  XP_024964426.1  77 KKLNHNASERDRRKRVNDLYAFLRSLLPMS-VDQKKKVSIPGTVSRALKYIPEL 129
                     6789*************************7.378888**************988 PP

Sequence ? help Back to Top
Protein Sequence    Length: 266 aa     Download sequence    
MLALSPPLFS TTYGWPLEDL IAQNLQQDYC NEANSYHSLL DFPSFDPIQQ DFVPENSISY  60
GGAVNGGTVD DLMMVAKKLN HNASERDRRK RVNDLYAFLR SLLPMSVDQK KKVSIPGTVS  120
RALKYIPELE KEVETLLRKK EKLWSYSSST ATPMQERLSI KKQSAKDATI KTKSLVISSV  180
SVLGEKEAVI QLISSTDHMS KNKEVGLFSK VLEYLEQEED GLVLLNATSF KCSGEGTLLN  240
TLHLQVQGDK KIEAEKLKEK LCSFQQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56970.11e-36bHLH family protein