PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024964204.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family BES1
Protein Properties Length: 320aa    MW: 34492.6 Da    PI: 9.205
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024964204.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF822200.84.2e-6221411149
          DUF822   1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssasaspesslq 95 
                     ++++r+ptwkErEnnkrRERrRRaiaaki++GLR++Gnyklpk++DnneVlkAL+ eAGw+ve+DGttyrkg+kp e++e+ g sasasp+ss+ 
  XP_024964204.1   2 TSGTRMPTWKERENNKRRERRRRAIAAKIFTGLRMYGNYKLPKHCDNNEVLKALADEAGWTVEPDGTTYRKGCKPVERMEV-GGSASASPCSSSY 95 
                     5899************************************************************************77775.6688899998844 PP

          DUF822  96 sslkssalaspvesysaspksssfpspssldsislasaasllpvlsvlslvsss 149
                             +sp +sy++sp  ss+ spss+   ++ ++ sl+p+l++ls++sss
  XP_024964204.1  96 -------HPSPYASYHPSPPCSSIASPSSSYAPNA-HPDSLIPWLKNLSSSSSS 141
                     .......7*******************99766655.58**********997776 PP
Sequence ? help Back to Top
Protein Sequence    Length: 320 aa     Download sequence    
MTSGTRMPTW KERENNKRRE RRRRAIAAKI FTGLRMYGNY KLPKHCDNNE VLKALADEAG  60
WTVEPDGTTY RKGCKPVERM EVGGSASASP CSSSYHPSPY ASYHPSPPCS SIASPSSSYA  120
PNAHPDSLIP WLKNLSSSSS SSNSAKLPHL YIHTTGSISA PVTPPMSSPT ARSPPRLKTD  180
TTWGAGAHAR APRHFSYLPS STPPSPGCHT LPNSEWFSGI RPTSPTFSLV ASNPFGFFKE  240
AAISHGGSRM WTPGQSGTCS PAIPPGFDNT ADIPMAELVS DEFAFGSNAG GRVKPWEGER  300
IHEVCVSDDL ELTLGSSKTR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G78700.11e-98BES1 family protein