PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024963980.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family FAR1
Protein Properties Length: 1027aa    MW: 115287 Da    PI: 6.5406
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024963980.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR125.54.2e-081031326190
            FAR1  61 gCkaklkvkkekdgkwevtkleleHnHela 90 
                     gC+a+l+++ + ++ w vtk+++eHnH+++
  XP_024963980.1 103 GCNAMLRIESKGQNSWAVTKFVKEHNHSIT 132
                     8**************************975 PP

2FAR1241.3e-072502786189
            FAR1  61 gCkaklkvkkekdgkwevtkleleHnHel 89 
                     gC+a+l+++ + ++ w+vtk+++eHnH++
  XP_024963980.1 250 GCNATLRIESKGQNSWVVTKFVKEHNHSV 278
                     8**************************97 PP

Sequence ? help Back to Top
Protein Sequence    Length: 1027 aa     Download sequence    
MKPSLDAGVM SVEEESMGQH GVAFDRYDDF DGAADPAGIS TPQDKDREFE PHLGLEFAYV  60
DAAKTFYNEY AKRVGFTTRV NQIARPTSDV AVREYSCATS GDGCNAMLRI ESKGQNSWAV  120
TKFVKEHNHS ITNTCKGHYH RQQRHFSGAT KDAAGVMSVE EERMGKHGVA FGRYDDLDGA  180
ADPAGISTAQ DKDRETEPHL GLEFAYVDAA KTFYNEYAKR VGFTICVNQI TRPTSDVAVR  240
EFSCATSGDG CNATLRIESK GQNSWVVTKF VKEHNHSVTN TSKVHYHRQR RHVSGATKIA  300
VESYPMVGVV PSGVMYLSMD GNRVPAETNR GSRSASMESN RAVQISDSIA NSARHATSKR  360
SLGRDAQNLL DYLRKMQAEN PGFYYAIQLD EDNRMSNVFW ADARSRTAYS HFGDAITLDT  420
MYRVKQYKVP FAPFTGINHH GQTILFGCAL LLDDSECTFT WLFKTFLAAM GDQAPVSIIT  480
DPEKSIQAAV AQVFPGTRHC ISKWHVLREG PDRLAHVCHM HPNFQAELYN CINLTETIEE  540
FETAWDLILD RYDLRRNDWL QLLYAVRQQW VPSYFHDTFF AAISFNQGSE SSFFVGYVNE  600
HTTVPLFFRQ YERALENSFE KEIEADFDTI CTTPILRTPS PMEKQAASLY TKTIFSKFQE  660
ELVETFVYTA NRIDGDGAVS TFRVAKFEDD QKAYLVSLNI EELRASCSCQ MFEYSGILCR  720
HILTVFTVTN VLTLPSHYIL KRWTRNAKCN IALEERADVN GQESLAIRYN QLLREAIKFS  780
EEGAIAPDTF TVAMAALREG GEKVAAVKTN VASFAPPSSQ VSVIGYDSRK TTSSAPDMTP  840
LLWPRQDEVT RRFNLNDAGL LAQSVTDLNL PRMAPVSLRR DDGHPDNMVI LPCLKSMTWV  900
MENRTLAPAN RVAVINLKLQ DHRRSPASES EVKFQLSTLT LEPMLRSMAY INEQLSAPAN  960
RVAVINLKLQ DTDTSSGESE VKFQVSRDTL GAMLRSMAYI REQLSNSNAA ESASEIPSKR  1020
PRKERTN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G27110.20.0FAR1 family protein