PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024963138.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family bHLH
Protein Properties Length: 351aa    MW: 38037.1 Da    PI: 6.9199
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024963138.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH32.61.4e-10202250355
                     HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                      +h+ +Er RR+ri +++  L+el+P +    +k   Ka +L + ++Y++sLq
  XP_024963138.1 202 NSHSLAERVRRERISERMKLLQELVPGC----NKITGKAVMLDEIINYVQSLQ 250
                     58**************************....999*****************9 PP

Sequence ? help Back to Top
Protein Sequence    Length: 351 aa     Download sequence    
MASSEDDNND SEMGFQYRGE MSSGSMFNNK SSSGSGNLFG SGWDPLENFG GSSSMVAVPP  60
NSELAYPENH QVQVGLIHQY QSGSGIAAGS GIADLVPKVG SFGSGSFSEM VNPFGNLNPE  120
CGGSSSPNSR DKRKSPHPQF NPITNGKREE RNDEKKQRIE ANWRGKQMGK QAKENSTDSG  180
GGGPTKDNNY IHVRAKRGQA TNSHSLAERV RRERISERMK LLQELVPGCN KITGKAVMLD  240
EIINYVQSLQ QQVEFLSMKL ATVNPELNID IERLVFKDMV HSRGSSSNPG FGFSSSHSYP  300
HGSLTGIPTT TAPLHPIHPQ QPVWDNDLHS LLQMGFDANL GQNGGGAKMD V
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G10120.15e-56bHLH family protein