PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_024962992.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
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Family | FAR1 | ||||||||
Protein Properties | Length: 713aa MW: 82770.4 Da PI: 8.9128 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 72.1 | 1.3e-22 | 98 | 192 | 2 | 90 |
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk......tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHel 89 +Y++YA ++GF+vr++ +k++ +ngei +r+fvCs+eg++++++ + e++ r+++ +r+gC+a+++++++k ++ +e++++++ HnH+l XP_024962992.1 98 MYRAYADNAGFDVRMHVKKTN-NNGEIQTRWFVCSREGNPKKKDFDslymqpGERRYRNTNIKRCGCNACIRIHLTKdRSCYEIYEFVEAHNHAL 191 8*************9876665.9999****************99999**9988899999*****************9999**************9 PP FAR1 90 a 90 + XP_024962992.1 192 F 192 7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 713 aa Download sequence |
MENPILKEFQ NNENDKLNYD MNTVGIRLPM MKKTIKAFRL PKYFFPSDLD SITSTQQEVD 60 YDIGESSEGI KFFIPKVDDA LKPNMKAQYA NINEVERMYR AYADNAGFDV RMHVKKTNNN 120 GEIQTRWFVC SREGNPKKKD FDSLYMQPGE RRYRNTNIKR CGCNACIRIH LTKDRSCYEI 180 YEFVEAHNHA LFNNNDRRFS RKNRQMKYTD FKSVLNSSSY KVGARRAHRI QTALNGGFEH 240 TRIFEIDFKN FKRDAELSAI FWADEIARIN YKEFGDVISF DGTFRTNKHA MIFVPFMAVD 300 NDKAVVVVGS ALISGETIDN FTWVLEAFLK CHAKQPVFVI TDQCSAMKQA IPKVSVALNH 360 DPMFNKVINK FVWNIHIGPS EFESRWNEMI DKYNLAGDTW FTETYEIRHS WIPAYYKDTP 420 MSGLMKTTSR SETIEKQIYR QSVHETLTRT TNPKFVTPLR LESHASSIYS RNVFFDIQKE 480 IKKAVWFCAI ETVEGRDDFK SFVISHKAKR SADNITYLVG RNYSTNTVEC NCNLFTRNGY 540 LCRHAFKVLI NDEVECIPKK YVLCRWKREL VPVQIQFVRV RYGEVNANKE KYIIDVYSNI 600 DDIISIARND QSILDRLGRN LDKFMVDIEK EVPYEDPSQQ KLDAIRDHLG VSIPDEVAIL 660 PPSGIRNKGC GTGKRLVSVS EKLQTNCKKT KRKCATCGQR SGHDSHNCPE LID |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38180.1 | 6e-46 | FAR1 family protein |