PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024962992.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family FAR1
Protein Properties Length: 713aa    MW: 82770.4 Da    PI: 8.9128
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024962992.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR172.11.3e-2298192290
            FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk......tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHel 89 
                     +Y++YA ++GF+vr++ +k++ +ngei +r+fvCs+eg++++++ +       e++ r+++ +r+gC+a+++++++k ++ +e++++++ HnH+l
  XP_024962992.1  98 MYRAYADNAGFDVRMHVKKTN-NNGEIQTRWFVCSREGNPKKKDFDslymqpGERRYRNTNIKRCGCNACIRIHLTKdRSCYEIYEFVEAHNHAL 191
                     8*************9876665.9999****************99999**9988899999*****************9999**************9 PP

            FAR1  90 a 90 
                     +
  XP_024962992.1 192 F 192
                     7 PP

Sequence ? help Back to Top
Protein Sequence    Length: 713 aa     Download sequence    
MENPILKEFQ NNENDKLNYD MNTVGIRLPM MKKTIKAFRL PKYFFPSDLD SITSTQQEVD  60
YDIGESSEGI KFFIPKVDDA LKPNMKAQYA NINEVERMYR AYADNAGFDV RMHVKKTNNN  120
GEIQTRWFVC SREGNPKKKD FDSLYMQPGE RRYRNTNIKR CGCNACIRIH LTKDRSCYEI  180
YEFVEAHNHA LFNNNDRRFS RKNRQMKYTD FKSVLNSSSY KVGARRAHRI QTALNGGFEH  240
TRIFEIDFKN FKRDAELSAI FWADEIARIN YKEFGDVISF DGTFRTNKHA MIFVPFMAVD  300
NDKAVVVVGS ALISGETIDN FTWVLEAFLK CHAKQPVFVI TDQCSAMKQA IPKVSVALNH  360
DPMFNKVINK FVWNIHIGPS EFESRWNEMI DKYNLAGDTW FTETYEIRHS WIPAYYKDTP  420
MSGLMKTTSR SETIEKQIYR QSVHETLTRT TNPKFVTPLR LESHASSIYS RNVFFDIQKE  480
IKKAVWFCAI ETVEGRDDFK SFVISHKAKR SADNITYLVG RNYSTNTVEC NCNLFTRNGY  540
LCRHAFKVLI NDEVECIPKK YVLCRWKREL VPVQIQFVRV RYGEVNANKE KYIIDVYSNI  600
DDIISIARND QSILDRLGRN LDKFMVDIEK EVPYEDPSQQ KLDAIRDHLG VSIPDEVAIL  660
PPSGIRNKGC GTGKRLVSVS EKLQTNCKKT KRKCATCGQR SGHDSHNCPE LID
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.16e-46FAR1 family protein