PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_024962824.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
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Family | GeBP | ||||||||
Protein Properties | Length: 318aa MW: 36961.2 Da PI: 5.089 | ||||||||
Description | GeBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF573 | 32.5 | 2.4e-10 | 100 | 188 | 2 | 98 |
DUF573 2 lfqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiW 96 lfq+ + +De lLq +i +++g++ + + ++ ++ +s++v++ ql +K rrLK + k+ ++ +++++ ++++ k+f+l+ kiW XP_024962824.1 100 LFQKKFGFDDEEKLLQVMIREGDTHGTQ--GFWRGQMDSMR--LSITVNEVQLYDKTRRLKTWYSKRLRN----DSNTLLNNQQFKVFQLCDKIW 186 689999999**********998888854..34566666554..677899******************999....888999999************ PP DUF573 97 gs 98 g+ XP_024962824.1 187 GK 188 95 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 318 aa Download sequence |
MTVSAGGDVE HERKAKRKQV ERDDVLESES EEDDSSSEGQ EDQMEDGSDS ESVGGSEDDS 60 SSEELDETTG LISEDVIDTS NKQPPEMQPI NDVKEASSNL FQKKFGFDDE EKLLQVMIRE 120 GDTHGTQGFW RGQMDSMRLS ITVNEVQLYD KTRRLKTWYS KRLRNDSNTL LNNQQFKVFQ 180 LCDKIWGKEE RENFKDVQSE KKQAVVDHQP HVKKLKKEKK KKEVEQSHVK KVKGKRIASE 240 VTKTRDMEYK HKYYKFVIEY VKKNVVDFPF DEAMEAVPVS IRPSLEKKWW DMNEVMMESY 300 KSLVHEIFEA AKPSSSHV |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 214 | 231 | KLKKEKKKKEVEQSHVKK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G01370.1 | 4e-06 | GeBP family protein |