PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024962815.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family GeBP
Protein Properties Length: 318aa    MW: 36961.2 Da    PI: 5.089
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024962815.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57332.52.4e-10100188298
          DUF573   2 lfqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiW 96 
                     lfq+ +  +De  lLq +i   +++g++    + + ++ ++  +s++v++ ql +K rrLK  + k+ ++    +++++ ++++ k+f+l+ kiW
  XP_024962815.1 100 LFQKKFGFDDEEKLLQVMIREGDTHGTQ--GFWRGQMDSMR--LSITVNEVQLYDKTRRLKTWYSKRLRN----DSNTLLNNQQFKVFQLCDKIW 186
                     689999999**********998888854..34566666554..677899******************999....888999999************ PP

          DUF573  97 gs 98 
                     g+
  XP_024962815.1 187 GK 188
                     95 PP

Sequence ? help Back to Top
Protein Sequence    Length: 318 aa     Download sequence    
MTVSAGGDVE HERKAKRKQV ERDDVLESES EEDDSSSEGQ EDQMEDGSDS ESVGGSEDDS  60
SSEELDETTG LISEDVIDTS NKQPPEMQPI NDVKEASSNL FQKKFGFDDE EKLLQVMIRE  120
GDTHGTQGFW RGQMDSMRLS ITVNEVQLYD KTRRLKTWYS KRLRNDSNTL LNNQQFKVFQ  180
LCDKIWGKEE RENFKDVQSE KKQAVVDHQP HVKKLKKEKK KKEVEQSHVK KVKGKRIASE  240
VTKTRDMEYK HKYYKFVIEY VKKNVVDFPF DEAMEAVPVS IRPSLEKKWW DMNEVMMESY  300
KSLVHEIFEA AKPSSSHV
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1214231KLKKEKKKKEVEQSHVKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G01370.14e-06GeBP family protein