PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024962801.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family GeBP
Protein Properties Length: 372aa    MW: 43277 Da    PI: 6.3392
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024962801.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57332.13.2e-10154242298
          DUF573   2 lfqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiW 96 
                     lfq+ +  +De  lLq +i   +++g++    + + ++ ++  +s++v++ ql +K rrLK  + k+ ++    +++++ ++++ k+f+l+ kiW
  XP_024962801.1 154 LFQKKFGFDDEEKLLQVMIREGDTHGTQ--GFWRGQMDSMR--LSITVNEVQLYDKTRRLKTWYSKRLRN----DSNTLLNNQQFKVFQLCDKIW 240
                     689999999**********998888854..34566666554..677899******************999....888999999************ PP

          DUF573  97 gs 98 
                     g+
  XP_024962801.1 241 GK 242
                     95 PP

Sequence ? help Back to Top
Protein Sequence    Length: 372 aa     Download sequence    
MGGWPKDVYK SIRLIEHKPL LPSIKKQPFL VRTGPFLHHL HLHLLIISIC IWLVMTVSAG  60
GDVEHERKAK RKQVERDDVL ESESEEDDSS SEGQEDQMED GSDSESVGGS EDDSSSEELD  120
ETTGLISEDV IDTSNKQPPE MQPINDVKEA SSNLFQKKFG FDDEEKLLQV MIREGDTHGT  180
QGFWRGQMDS MRLSITVNEV QLYDKTRRLK TWYSKRLRND SNTLLNNQQF KVFQLCDKIW  240
GKEERENFKD VQSEKKQAVV DHQPHVKKLK KEKKKKEVEQ SHVKKVKGKR IASEVTKTRD  300
MEYKHKYYKF VIEYVKKNVV DFPFDEAMEA VPVSIRPSLE KKWWDMNEVM MESYKSLVHE  360
IFEAAKPSSS HV
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1268285KLKKEKKKKEVEQSHVKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G01370.17e-06GeBP family protein