PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_024962801.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
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Family | GeBP | ||||||||
Protein Properties | Length: 372aa MW: 43277 Da PI: 6.3392 | ||||||||
Description | GeBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF573 | 32.1 | 3.2e-10 | 154 | 242 | 2 | 98 |
DUF573 2 lfqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiW 96 lfq+ + +De lLq +i +++g++ + + ++ ++ +s++v++ ql +K rrLK + k+ ++ +++++ ++++ k+f+l+ kiW XP_024962801.1 154 LFQKKFGFDDEEKLLQVMIREGDTHGTQ--GFWRGQMDSMR--LSITVNEVQLYDKTRRLKTWYSKRLRN----DSNTLLNNQQFKVFQLCDKIW 240 689999999**********998888854..34566666554..677899******************999....888999999************ PP DUF573 97 gs 98 g+ XP_024962801.1 241 GK 242 95 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 372 aa Download sequence |
MGGWPKDVYK SIRLIEHKPL LPSIKKQPFL VRTGPFLHHL HLHLLIISIC IWLVMTVSAG 60 GDVEHERKAK RKQVERDDVL ESESEEDDSS SEGQEDQMED GSDSESVGGS EDDSSSEELD 120 ETTGLISEDV IDTSNKQPPE MQPINDVKEA SSNLFQKKFG FDDEEKLLQV MIREGDTHGT 180 QGFWRGQMDS MRLSITVNEV QLYDKTRRLK TWYSKRLRND SNTLLNNQQF KVFQLCDKIW 240 GKEERENFKD VQSEKKQAVV DHQPHVKKLK KEKKKKEVEQ SHVKKVKGKR IASEVTKTRD 300 MEYKHKYYKF VIEYVKKNVV DFPFDEAMEA VPVSIRPSLE KKWWDMNEVM MESYKSLVHE 360 IFEAAKPSSS HV |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 268 | 285 | KLKKEKKKKEVEQSHVKK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G01370.1 | 7e-06 | GeBP family protein |