PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024962573.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family bHLH
Protein Properties Length: 353aa    MW: 38553.7 Da    PI: 5.4517
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024962573.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH37.63.9e-12108159155
                     CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     ++++h  +Er+RR+++N+ +  Lr l+P     + k+ + a+i   +v+YI +Lq
  XP_024962573.1 108 QKVSHITVERNRRKQMNEHLTVLRALMPCF---YVKRGDQASIIGGVVDYIAELQ 159
                     6899*************************9...9*******************99 PP

Sequence ? help Back to Top
Protein Sequence    Length: 353 aa     Download sequence    
MSGDRCTSLT DFFDSYAGQF EETNFLSPST ASTNDIFSIL EVFEGGSDEF TSMMPLETGF  60
HAKDHKSTSS CSVLQDLVEA ELEMLSPKTK RQKLSSVDQG GANSDGQQKV SHITVERNRR  120
KQMNEHLTVL RALMPCFYVK RGDQASIIGG VVDYIAELQQ VLQSLEAKKQ RKVYSDVLSP  180
RLVSSSPRPS PLSPRKPPIS PRPLLPISPR TPQPVSPYKP RFQQPATTNS SYIPPIPSPM  240
AANLTPPSLE PSPSSSSSTS DIVNELVANS KSAIADVEVK FSGPNLLLKT ISPRLPGQAT  300
KIVSVLEDLS LEILQASINT ADETMVQSFT IKIGIECQLS AEDLVEHIQQ TFS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G06120.19e-50bHLH family protein