PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024961717.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family G2-like
Protein Properties Length: 307aa    MW: 34522.6 Da    PI: 10.1848
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024961717.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like99.22.8e-31125178255
         G2-like   2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                     pr+rWt++LH++F++av+ LGG+e+AtPk++ elm+vk+Ltl+hvkSHLQ+YR+
  XP_024961717.1 125 PRMRWTSTLHAHFIHAVQLLGGHERATPKSVQELMNVKDLTLAHVKSHLQMYRT 178
                     9****************************************************7 PP
2Myb_DNA-binding45.32e-14126177148
                      TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 
                      r+rWT  ++  +++av++lGg+   t+k++ + m+ k +tl ++ks++q+y+
   XP_024961717.1 126 RMRWTSTLHAHFIHAVQLLGGHeraTPKSVQELMNvKDLTLAHVKSHLQMYR 177
                      89************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 307 aa     Download sequence    
MTSGAATCFP DLSLQISPPA ASVTGCITKR PRSSSSTGSD LSQENKFHHH QKSWAAADHI  60
CHQFDQPQLS LGLEIGALNH HRHLNINTVP SQPQHHRYHL PRIYGHDFRR RSRMVNFARR  120
STRAPRMRWT STLHAHFIHA VQLLGGHERA TPKSVQELMN VKDLTLAHVK SHLQMYRTVK  180
GTDKVAAGLL ADQMQVINSK TPLTFLEVRG DISVSPSTAL QSQSCRRSST SSLETNDSYY  240
PMRENTSSHH CPSPIMNDST KABEVEMVTL QYLSKKMKLR SNPSSLASEK LLNLEFTLGS  300
RQMDHTF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G42630.23e-46G2-like family protein