PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024961567.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family ZF-HD
Protein Properties Length: 308aa    MW: 34680.6 Da    PI: 7.6413
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024961567.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer92.24.7e-2993148359
     ZF-HD_dimer   3 kvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRrevee 59 
                      vrYkeClkNhAa++Gg+a+DGCgEfm+  geegt +al+C+ C+CHRnFHR+e ++
  XP_024961567.1  93 VVRYKECLKNHAAAMGGKATDGCGEFMAC-GEEGTLEALTCSVCNCHRNFHRKEIDD 148
                     689*************************9.999********************9875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 308 aa     Download sequence    
MIPYNILNIT ISGRMKDGWV IINPRTRAKM EFPPEEEVEE EGEMALPISS TYGDGQLIHH  60
DHILPLSLQH HQQQQPPPSA TSMEDISKKM AVVVRYKECL KNHAAAMGGK ATDGCGEFMA  120
CGEEGTLEAL TCSVCNCHRN FHRKEIDDGH HHHHHHPIRT TSYDCKSFGY NHNNAGALVP  180
SIKGPPPKIM SYNMAMGSFP SESDYQEDGG GFMSRHPLAA GAAPAPHMAV KKRFRTKFTH  240
EQKEKMLVFA DKIGWKMQKQ EESMIQDFCQ EIGIKRRVLK VWMHNNKQNL AKNTCCNSIS  300
INPPQDPN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G02540.12e-68ZF-HD family protein