PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_024961304.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
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Family | C2H2 | ||||||||
Protein Properties | Length: 255aa MW: 29344.1 Da PI: 9.5277 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 19.8 | 2.1e-06 | 136 | 158 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ C+k F+r nL+ H r H XP_024961304.1 136 FVCEVCHKGFPRDQNLQLHRRGH 158 89*******************88 PP | |||||||
2 | zf-C2H2 | 15.5 | 5e-05 | 214 | 236 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ykC C+k++ s+Lk H++++ XP_024961304.1 214 YKCLRCPKMYAVESDLKAHLKVC 236 9*******************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 255 aa Download sequence |
MNKEEKPNSV YVGDMNETEL VRNVANFGAV SLPLLFAFKT SSSDDETIIK LYKAMDHQNV 60 IKMDMAFGSS SMLLLGKWNE EDHVNLQEFD IKPDDHVVPP LQPLTVPLRK RKNPADLDAA 120 EIVALSPTTL MTKNRFVCEV CHKGFPRDQN LQLHRRGHNL PWKLKQRTRD VRVKRKVYLC 180 PEPSCIHHNP CHALGDLSGI KKHYSRKHVS ERNYKCLRCP KMYAVESDLK AHLKVCGKKG 240 YRCQCNTLFS RYIIS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G45260.1 | 8e-68 | C2H2 family protein |