PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_024961018.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
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Family | FAR1 | ||||||||
Protein Properties | Length: 678aa MW: 78040.9 Da PI: 9.449 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 60.1 | 7.1e-19 | 35 | 130 | 1 | 90 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk......tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHe 88 ++Y++Y+ + F++r ++k + ge+ +r fvCskeg++ +++ + e++rr+++ +rtgCka+lkv+ k +g++ev+++ + HnH XP_024961018.1 35 NMYRKYGDVARFDIRLGSKKLN-ALGEVQTRYFVCSKEGNPPKKEFDslevssGERKRRNTNFKRTGCKACLKVHYVKvSGRYEVYHFIEGHNHM 128 58***************98777.8899**************999988999999999999*******************9**************** PP FAR1 89 la 90 l+ XP_024961018.1 129 LC 130 98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 678 aa Download sequence |
MGESPGGTKI WVPNVDSNIC PKVGDFFSSV ESVENMYRKY GDVARFDIRL GSKKLNALGE 60 VQTRYFVCSK EGNPPKKEFD SLEVSSGERK RRNTNFKRTG CKACLKVHYV KVSGRYEVYH 120 FIEGHNHMLC RSDEKMFTRS RRQLDYKERR NVYHASSSKV GITQSRRMQL AMNGGLVASG 180 GTARDHMNFR RDIMLFVGDK DAQIHAMIFV PFVAIDNHKK SVVVGASLIR NESVVNFIWV 240 LNAFMKAHGT QPQFVITDQC AAMKQAIPIV FSESTHRLCM WHITKKVKEK ICDHVAHGTP 300 FKSKFNKLVW NVHLSPKFFE EKWNXLMDEF GLRGHSWFEE MYAIRESWIP AYFKDYPMSG 360 LMKTTSRSES INSFFNVYXK YWNDLVYFLN TFDDAIESQR KEHCSLEVAT RTTIPKLLSP 420 SKIEAQAANV YTKTMFFEVQ KEMNKAVWFC GVVDVVEVXD KMIYSITHKN KNSEIKATYK 480 VVHDVGDDSF DCSCNHFVRN GILCRHAFKV MLNSEVQCIP DKYILPRWRR ELVPVELLPA 540 RVRYGEMDVE KQALMNQATS MFDLIIGRVR NDKGSLTEFV ERLERLGDEI SVDIPILTXT 600 EQKRNDIQKL LCDSEPESVD VLPPKGIRNK GCGTGKRIVG MSEKISMNAK KPKRLCRTCE 660 KMGWHDSRNC PSKGDSNK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38180.1 | 5e-60 | FAR1 family protein |