PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024961018.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family FAR1
Protein Properties Length: 678aa    MW: 78040.9 Da    PI: 9.449
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024961018.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR160.17.1e-1935130190
            FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk......tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHe 88 
                     ++Y++Y+  + F++r  ++k +   ge+ +r fvCskeg++ +++ +       e++rr+++ +rtgCka+lkv+  k +g++ev+++ + HnH 
  XP_024961018.1  35 NMYRKYGDVARFDIRLGSKKLN-ALGEVQTRYFVCSKEGNPPKKEFDslevssGERKRRNTNFKRTGCKACLKVHYVKvSGRYEVYHFIEGHNHM 128
                     58***************98777.8899**************999988999999999999*******************9**************** PP

            FAR1  89 la 90 
                     l+
  XP_024961018.1 129 LC 130
                     98 PP

Sequence ? help Back to Top
Protein Sequence    Length: 678 aa     Download sequence    
MGESPGGTKI WVPNVDSNIC PKVGDFFSSV ESVENMYRKY GDVARFDIRL GSKKLNALGE  60
VQTRYFVCSK EGNPPKKEFD SLEVSSGERK RRNTNFKRTG CKACLKVHYV KVSGRYEVYH  120
FIEGHNHMLC RSDEKMFTRS RRQLDYKERR NVYHASSSKV GITQSRRMQL AMNGGLVASG  180
GTARDHMNFR RDIMLFVGDK DAQIHAMIFV PFVAIDNHKK SVVVGASLIR NESVVNFIWV  240
LNAFMKAHGT QPQFVITDQC AAMKQAIPIV FSESTHRLCM WHITKKVKEK ICDHVAHGTP  300
FKSKFNKLVW NVHLSPKFFE EKWNXLMDEF GLRGHSWFEE MYAIRESWIP AYFKDYPMSG  360
LMKTTSRSES INSFFNVYXK YWNDLVYFLN TFDDAIESQR KEHCSLEVAT RTTIPKLLSP  420
SKIEAQAANV YTKTMFFEVQ KEMNKAVWFC GVVDVVEVXD KMIYSITHKN KNSEIKATYK  480
VVHDVGDDSF DCSCNHFVRN GILCRHAFKV MLNSEVQCIP DKYILPRWRR ELVPVELLPA  540
RVRYGEMDVE KQALMNQATS MFDLIIGRVR NDKGSLTEFV ERLERLGDEI SVDIPILTXT  600
EQKRNDIQKL LCDSEPESVD VLPPKGIRNK GCGTGKRIVG MSEKISMNAK KPKRLCRTCE  660
KMGWHDSRNC PSKGDSNK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.15e-60FAR1 family protein