PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024960758.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family bHLH
Protein Properties Length: 440aa    MW: 48362.1 Da    PI: 6.422
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024960758.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH162.3e-053353691554
                     HHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH  15 riNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                     ++ +++  L++l+ +      +K + a++L +A+eYIk L
  XP_024960758.1 335 KMGDRITALQQLVSPF-----GKTDTASVLSEAIEYIKFL 369
                     6778999999999998.....8****************98 PP

Sequence ? help Back to Top
Protein Sequence    Length: 440 aa     Download sequence    
MADNWWDSSS RTRPCLDSVS VTSSIDLFQD THDHTTTAAA TTTATATATT SLHMMGLGLS  60
SQSLPQSLDW NQALLRGDQK SNQSGYRNLL QDQDNNLSSN TNTFQLENNQ WRSQKMYSAN  120
SQDSASDFKQ INVVRGFQLD QPMHDSDNES IITCQGLNSS FQSMDLYGSP ASTIMQSLFG  180
SDNNNQQQDS GFDQNQGMSY SLYQSSYGSM NMPGGGGGGX GSCRLNWSKF PPQPQEFAIN  240
AHPKVQLPIA DIGGNQLHFS NNARFWNASG GGVNDIRSGF FPSLQMQLPS SSFEDKPKMT  300
SKTVKESSSE SSSNKRPRTE TQSPLAAFSK VKKEKMGDRI TALQQLVSPF GKTDTASVLS  360
EAIEYIKFLH EQVSVLSTPY MKNGASIMQH QQTVDKSVIG PIRQDLRSRG LCLVPVSSTF  420
PVTHETTVDF WTPTFGGTFR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G20640.16e-66bHLH family protein