PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024960480.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family BES1
Protein Properties Length: 309aa    MW: 33370 Da    PI: 9.3173
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024960480.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF822197.74e-6121402149
          DUF822   2 gsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssasaspesslqs 96 
                     +++r+ptwkErEnnkrRERrRRai+aki+aGLR++Gnyklpk++DnneVlkAL+ eAGw+ve DGttyrkg+kpl   +++g sasasp ss+q 
  XP_024960480.1   2 SGTRMPTWKERENNKRRERRRRAISAKIFAGLRMYGNYKLPKHCDNNEVLKALADEAGWTVETDGTTYRKGCKPL-DRAQIGGSASASPGSSYQ- 94 
                     689************************************************************************.77788999**********. PP

          DUF822  97 slkssalaspvesysaspksssfpspssldsislasaasllpvlsvlslvsss 149
                            +sp +sy++sp sss+ sp+s+ ++ + ++ sl+p+l++ls++sss
  XP_024960480.1  95 -------PSPYTSYNQSPPSSSIASPTSSPFAVNPHPDSLIPWLKNLSSSSSS 140
                     .......***************************999**********997776 PP
Sequence ? help Back to Top
Protein Sequence    Length: 309 aa     Download sequence    
MSGTRMPTWK ERENNKRRER RRRAISAKIF AGLRMYGNYK LPKHCDNNEV LKALADEAGW  60
TVETDGTTYR KGCKPLDRAQ IGGSASASPG SSYQPSPYTS YNQSPPSSSI ASPTSSPFAV  120
NPHPDSLIPW LKNLSSSSSS NSSKLPHVYI HNGSISAPVT PPTSSPSAQS PPRIKTDSAW  180
GAPHFSYLPS STPPSPARQT LPNYEWFSGI QVPQSGPTSP TFSLVAANPF GFREAGVGHG  240
GSRMWTPGQS GTCSPAIPQG FDNNADIPMS EVVSDEFAFG RVKPWQGERI HEECGSDELE  300
LTLGSSKTR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G78700.13e-49BES1 family protein