PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_024960379.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
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Family | bHLH | ||||||||
Protein Properties | Length: 322aa MW: 36040.2 Da PI: 8.158 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 33.9 | 5.5e-11 | 143 | 189 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 h +Er+RR+++ ++f L l+P + kK++Ka++L A++++k Lq XP_024960379.1 143 DHILAERKRREKLSQRFIALSALVPGL-----KKMDKASVLGDAINHLKTLQ 189 5899***********************.....9******************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 322 aa Download sequence |
MEDPCFNFQH PVNPFDHQLD SMAIAAATFG DTRDQVHAHT GVFDYYKPAM EPSPRPTKQL 60 KTNSWNSSIS TEHSSMNLNQ GTVVKPKEEM AVSSKISHGF LPCDDKLSPS HLQFQQKNSG 120 FNQGHDGGVN GAKSGPRLSP AQDHILAERK RREKLSQRFI ALSALVPGLK KMDKASVLGD 180 AINHLKTLQE KVKTLEEQIK KRPNTESVVF VKRYELLVDG AESSSSDENF SGGPIHEQLP 240 EIEARFFGND VLIRIHCEKK GGILEKILTE IEKLHLSVIN STAMTFANHA LDITVIAQMD 300 KEFAMTMKDL MKNLRFALKK FM |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 148 | 153 | ERKRRE |
2 | 149 | 154 | RKRREK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G37850.1 | 1e-61 | bHLH family protein |