PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_024960296.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
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Family | MYB | ||||||||
Protein Properties | Length: 254aa MW: 28756.9 Da PI: 6.7793 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 49.1 | 1.3e-15 | 14 | 62 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 rg+W++eEd +l + ++ +G+g +W + +++ g++R++k+c++rw++yl XP_024960296.1 14 RGPWSPEEDTILRNHIQNHGTGgNWIALPHKAGLKRCGKSCRLRWLNYL 62 89*********************************************97 PP | |||||||
2 | Myb_DNA-binding | 41.6 | 2.8e-13 | 71 | 111 | 4 | 46 |
S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +T+eEd+++ + G++ W+ Ia+++ gRt++++k++w++ XP_024960296.1 71 FTEEEDDIISSLYVNIGSR-WSVIASHLR-GRTDNDVKNHWNT 111 9******************.*********.***********97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 254 aa Download sequence |
MGRSPCCDKS KVKRGPWSPE EDTILRNHIQ NHGTGGNWIA LPHKAGLKRC GKSCRLRWLN 60 YLRPDIKLGG FTEEEDDIIS SLYVNIGSRW SVIASHLRGR TDNDVKNHWN TKLKKKLSSS 120 YNSTTTTTTT TATMTTSINL MRCSDPTTLL PKQEADYYQT IPKPIFDDSM NVADYQQPMM 180 ISNSNDANFN DNVSSFQENQ GSSPNAFLMG NNYASWRDNG DGMTNSDGDF LLEDFDFRQV 240 ISEVANFNHS SQWF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G36890.1 | 2e-68 | MYB family protein |