PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024960072.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family bHLH
Protein Properties Length: 320aa    MW: 35812.9 Da    PI: 9.1113
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024960072.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH37.73.8e-12143189455
                     HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                      h  +Er+RR+++  +f  L  llP +     kK++Ka++Le A +YI++Lq
  XP_024960072.1 143 DHMLAERKRREKLARRFISLSALLPDL-----KKMDKATVLEDAANYIQELQ 189
                     58899**********************.....9******************9 PP

Sequence ? help Back to Top
Protein Sequence    Length: 320 aa     Download sequence    
MDFSSAWLSE LEMQDQGFMN QYQMIKPYHL VADFSVDSFS SESNTENPSV VGQAIQIPAS  60
IKETANNSKL PSYKKANSIN KNLTPIDEKP KTKPLPDVPN TFTISFGDLK PKDEVIPFKD  120
SFGYTTGTKK VPTVIRNRIQ LQDHMLAERK RREKLARRFI SLSALLPDLK KMDKATVLED  180
AANYIQELQS RVKELEGSSD LKTKNNMQSV ISAKRSKLGH TYEEGSSSDE ANYGESHSPS  240
NFEIEVRMSG SSVLVRIYCH KNYVSLVKVL SEMQKLGLLI TSSAALPFAN TTLLISIVAK  300
KMDDFSMTSN DLVKNLQLAI
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1148153ERKRRE
2149154RKRREK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37850.15e-37bHLH family protein