PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_024960044.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
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Family | G2-like | ||||||||
Protein Properties | Length: 430aa MW: 46462.8 Da PI: 8.268 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 106.6 | 1.4e-33 | 60 | 114 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprlrWt eLHerFv+av+qLGG++kAtPkti+++m+vkgLtl+h+kSHLQk+Rl XP_024960044.1 60 KPRLRWTVELHERFVDAVAQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQKFRL 114 79****************************************************8 PP | |||||||
2 | Myb_DNA-binding | 71.4 | 1.5e-22 | 62 | 113 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT e++e++vdav+qlGg+ t+ktI+r mg kg+tl+++ks++qk++ XP_024960044.1 62 RLRWTVELHERFVDAVAQLGGPdkaTPKTIMRVMGvKGLTLYHLKSHLQKFR 113 89************************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 430 aa Download sequence |
MFHSKKAAAA STTAMNSLHH NHHHHHERPN MCGVGGNNHS SPGAGTIQGD SGLVLTTDPK 60 PRLRWTVELH ERFVDAVAQL GGPDKATPKT IMRVMGVKGL TLYHLKSHLQ KFRLGKQPHK 120 EFNDHSIKDS ERASALELQR SSSASSSGMM GRSMNEMQIE VQRRLHEQLE VQRHLQLRIE 180 AQGKYMQTIL EKACQTLAGD QSMAAADYNN GNKVVGGNAT GISMNMNMNI SASTSSTSHL 240 EQAAAAAAGH RGGMMLLPGD HVPSAIKDFG SLNFPSFQDL NLYGTSPSPS PPAVTAAGSA 300 VGRKSPLIWS DDELHLQDDH HRPPEHHHIG VLSSNSSEGG GDGCDLDSTV PSHIYETKPL 360 TLTSSHNIDH HHHHLGLGSV DHQKKLDRTS PRRPPLSSNS SMDNMRATLS TATTNSTSNM 420 SPQGRSSSFG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G79430.2 | 1e-79 | G2-like family protein |