PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_024959801.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
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Family | bHLH | ||||||||
Protein Properties | Length: 254aa MW: 28789.9 Da PI: 6.6448 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 34.2 | 4.4e-11 | 60 | 107 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 ah Er+RR+++++ f+ L llP++ +K + ++i+ +A+ YI Lq XP_024959801.1 60 AHLWTERQRRKKMRTMFHDLHALLPQL----PPKAEMSTIVDEAISYITTLQ 107 56668*********************6....3899999***********998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 254 aa Download sequence |
MGERDGEVGF FWAMADNSNS GASSEDKSTV VNKLPDDHSP INQPHDIGSG DIQPVDDHAA 60 HLWTERQRRK KMRTMFHDLH ALLPQLPPKA EMSTIVDEAI SYITTLQETL KDLEIQKLKR 120 LNNRESFLAD HGSITTCTHF DIISRPFSKI FPAVWCSPIV FRTWTSSNIT LNVCGPDAHI 180 SICSSRKRGL LTAICVVLEK HNLEIVSAHI SSDRYKSMFM IHVRVNVGDE LMKIFPYDEV 240 YKLAALEIML WVNS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G49770.1 | 1e-43 | bHLH family protein |