PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_024959071.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
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Family | NAC | ||||||||
Protein Properties | Length: 474aa MW: 53546.6 Da PI: 7.0074 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 115.4 | 5.7e-36 | 40 | 182 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk......lelee....vikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk..... 79 lp+G++F+Ptd+el+ e+L++kve+k+ + + +i+ +i++++P++Lp v+ + + +fF++ +k+y+tg+rk+r+++ XP_024959071.1 40 LPAGVKFDPTDQELI-EHLEAKVEAKNlkshplI---DefipTIEGEdGICYTHPEKLP-GVTRDGLSRHFFHRPSKAYTTGTRKRRKIQtecdl 129 799************.99*********6554442...143333666646**********.555666799******************73334555 PP NAM 80 ...sgyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128 + +W++tgk+++v++ +g+++g+kk+Lv+y g+++k+ekt+Wvmh+y+l XP_024959071.1 130 qggETRWHKTGKTRPVMV-NGKQKGCKKILVLYtnFGKNRKPEKTNWVMHQYHL 182 544778************.999***********5547999999*********98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 474 aa Download sequence |
MNISSCDLID AKLEEHQLCG SKHCPGCGHK LEGKPDWVGL PAGVKFDPTD QELIEHLEAK 60 VEAKNLKSHP LIDEFIPTIE GEDGICYTHP EKLPGVTRDG LSRHFFHRPS KAYTTGTRKR 120 RKIQTECDLQ GGETRWHKTG KTRPVMVNGK QKGCKKILVL YTNFGKNRKP EKTNWVMHQY 180 HLGQHEEERE GELVVSKIFY QTQPRQCNWS ERAMNNNILL NNIRSTEGVN IQMNEMNNGS 240 SRRESRSGSG SCSSSKEVNV TPTTTITTAT AATVTAHNNI GDELVGTVLS SYNPMDQMQH 300 FKGVDQYSFM PYRKSFGEVG TTGGEASITC DGRDLQRQQQ QQQQQHMNLE DDQHQNPHHH 360 QNYPHQHQVA TTAFHVSRPS HAISAIISPS PLHHTSIILD DDSFHVARIM ENFQQQQHHH 420 NKIGGRSASG LEELIMGCTP SSSTDIKEEC SITNPQEADW LKYSTFWPDP DHHV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G29230.1 | 1e-141 | NAC family protein |