PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_024958963.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
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Family | ERF | ||||||||
Protein Properties | Length: 151aa MW: 16845.6 Da PI: 4.2145 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 22.3 | 3.2e-07 | 7 | 34 | 29 | 56 |
AP2 29 krfslgkfgtaeeAakaaiaarkklege 56 ++ +lg+++t eeAa +++ + kl+g+ XP_024958963.1 7 QQLWLGTYDTSEEAAMVYDNVAIKLHGA 34 789***********************95 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 151 aa Download sequence |
MDSATRQQLW LGTYDTSEEA AMVYDNVAIK LHGAAAITNF VFPTVLENPP PTNVTSMSDH 60 HPNRKSLKLP LADAPSLDYQ SFGSIQIDDE VASFNMHHDF RSINSKQFDD FGIAPIAFDF 120 ISETGCGSSS TLKIDNYFED ISDRTLDLWF S |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G23750.1 | 2e-12 | ERF family protein |