PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_024958794.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
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Family | bHLH | ||||||||
Protein Properties | Length: 212aa MW: 24096.6 Da PI: 6.7819 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 39.8 | 8.2e-13 | 2 | 50 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h ++Er+RR+++N+ ++ Lr+llP++ + k+ + a+i A+e++k+L+ XP_024958794.1 2 NHIAVERNRRKQMNHHLAALRSLLPES---YLKRGDQASIIGGAIEFVKELE 50 799************************...9******************995 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 212 aa Download sequence |
MNHIAVERNR RKQMNHHLAA LRSLLPESYL KRGDQASIIG GAIEFVKELE HLLQSLEAQK 60 FLSIRQQDPT IHDENSNNPT QECEIPQLPL HFQKFFTCPQ YTWSSIPNTN ASKSNATMAD 120 IEVNLVQTHA NLRILSRKRL KQLSKMVVFL QTCYLSILHL NVTTFDPFVL YSITLKVEEG 180 CCLNSADEIA GAVHQILGLI EQEATLCIDS RD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G72210.1 | 2e-60 | bHLH family protein |