PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU31061.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family GRAS
Protein Properties Length: 768aa    MW: 83229 Da    PI: 5.9771
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU31061.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS335.21.2e-1024077672374
        GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNq 100
                 +++L+++Ae v++g+   aq +Larl+++ sp g+p+ R+a++ +eAL+  l+ ++++l +++++s+    + + ++ a+k fse+sP+ +f+++t+Nq
  PHU31061.1 407 IDQLFKAAELVQTGNPVHAQGILARLNHQLSPIGKPFYRAAFHCKEALQLLLHANTNNLNASMASSSPF--TLIFKIGAYKSFSEISPVAQFANFTCNQ 503
                 689***************************************************999999988555544..5*************************** PP

        GRAS 101 aIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeL..rvk 197
                 a+le ++g er+Hi+Dfdi++G+QW++L+q+La R++g+p+l+iT+++sp+++++ el  t+e+L +fA+e+++ fef++l  +++++   ++L   ++
  PHU31061.1 504 ALLEVLDGFERIHIVDFDIGYGGQWASLMQELALRSGGAPTLKITALASPSTHDQLELGLTRENLIHFASEINMAFEFEILSIDSFNST-SWSLppLIS 601
                 ********************************************************************************977766665.444533478 PP

        GRAS 198 pgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivn 296
                 ++Ea+aVnl ++  + +  ++sl+     vL++vk+lsP++vv v++ +d+++ +F +++++al+ ys l++sl+a    + ++ +k+Er+l+++ i+ 
  PHU31061.1 602 ENEAIAVNLPVSSLSSY--QLSLPL----VLRFVKQLSPRIVVSVDRGCDRTDLPFPNHVIQALQSYSNLLESLDAV-NVNFDALQKIERFLVQPGIER 693
                 8**********877776..555555....*********************************************665.3466999************** PP

        GRAS 297 vvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                 +v+ + ++     e+ ++Wr  + ++GF+p++ls+++++qa++++++++++g++ve+++ slvl+W++++L+s+SaWr
  PHU31061.1 694 IVMGRFRS----PEKTQHWRTLFLSSGFSPLSLSNFTESQAECVVKRTPVRGFHVEKRQSSLVLCWQRKELISASAWR 767
                 **998877....9****************************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 768 aa     Download sequence    
MKGMPLPFGF EGKGVLELDV LFNKNTSILN SWNHNNNSKE SCYLVNSPSA VLDTIRSPRP  60
ITSSSTLSSS LGDGGGGGGG GGTASTDTAG GGVAAVSANP SSKWRQQDNT TATSSNVGGA  120
ESELQQVQTP SLEMGSAAAA AAATGGEKCA MEEWEGGLPE SVMASPCQEQ SILRWIMGDV  180
DDPSMANLNR VLQVSGPGDY EFNGGFGVVD QGFGVDPVGQ IGSFMPAISS SSSFPNTRMN  240
SDKIGLVSNP PPPANLLQNP IFPSLSNNLG PIAFGQTQQQ PYESTDLKPQ SFNSQFLINQ  300
HQTQIPQNPS FLLPLPFGQQ EQNLVLPPQA KRHNPGLEPG SQISKGLFLD AGHQQQPTPP  360
QGLAPQLQLL PHFRPGAMGT KPKMVGEEMG QFHQLQQQQQ QQQQAIIDQL FKAAELVQTG  420
NPVHAQGILA RLNHQLSPIG KPFYRAAFHC KEALQLLLHA NTNNLNASMA SSSPFTLIFK  480
IGAYKSFSEI SPVAQFANFT CNQALLEVLD GFERIHIVDF DIGYGGQWAS LMQELALRSG  540
GAPTLKITAL ASPSTHDQLE LGLTRENLIH FASEINMAFE FEILSIDSFN STSWSLPPLI  600
SENEAIAVNL PVSSLSSYQL SLPLVLRFVK QLSPRIVVSV DRGCDRTDLP FPNHVIQALQ  660
SYSNLLESLD AVNVNFDALQ KIERFLVQPG IERIVMGRFR SPEKTQHWRT LFLSSGFSPL  720
SLSNFTESQA ECVVKRTPVR GFHVEKRQSS LVLCWQRKEL ISASAWRC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00150.11e-127GRAS family protein