PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU30939.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family Trihelix
Protein Properties Length: 329aa    MW: 37110.2 Da    PI: 9.4261
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU30939.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix59.49.2e-1933125186
    trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm...rergferspkqCkekwenlnkrykkikegek....krtsessstcpyfdqle 86 
                 +W+++e+ aLi+a+re++ +lrrg+l++++W+ev++ +         ++++qC++k+e+l+kry+++ +++      r+ +  s +++f++++
  PHU30939.1  33 CWSHDETIALIDAYREKWYSLRRGNLRANHWQEVADDVavrCPIDPPKTAVQCRHKMEKLRKRYRAEIQRAApyggARSHRYCSAWVHFKRMD 125
                 8*************************************7544455599*****************9998875111133445556777888876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 329 aa     Download sequence    
MAAQDFSNVT PTGVLPSSDV TVAVASRRLP PPCWSHDETI ALIDAYREKW YSLRRGNLRA  60
NHWQEVADDV AVRCPIDPPK TAVQCRHKME KLRKRYRAEI QRAAPYGGAR SHRYCSAWVH  120
FKRMDMMERG PNAVSPPPSD DEGEEDVEDY RQNSVKLIGD LYGNNVNPGN RSSYPGVVSN  180
GGGGFRIRIP GFSGSHPGSA PPMAKPYGRF EDSGVENPNN FGSSKMYRDG FVKKPDLGKR  240
VVGEGMGEKR KGDPMEEMVD AIKVLGDVFV RTERMKMDMA RELERARMEM EMKRTEMILE  300
SQQRIVEAFA QAMSEKKHKK AKRMPTPEC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44730.18e-58Trihelix family protein