PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHU30896.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | GRAS | ||||||||
Protein Properties | Length: 214aa MW: 25156.8 Da PI: 6.6775 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 189 | 3.1e-58 | 21 | 194 | 190 | 364 |
GRAS 190 eleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvEre 288 + e+L+v+p E laVn++l lh+++des+ ++++rd++L++vkslsPk+v++veqe+++n+ +F+ +fle+l+yy ++f+s+++ lpr+++eri+vE++ PHU30896.1 21 DKEDLNVRPAEPLAVNFALVLHHMHDESAGTQNHRDRLLRMVKSLSPKIVTLVEQESNTNTVQFFPHFLETLNYYLYVFESIHVALPRDHKERINVEQH 119 5689*********************************************************************************************** PP GRAS 289 llgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkd 364 +l+rei+n++ e+a+r+erhe le+Wr+r+++a Fkp+pls+++++++k+ll++++ + y+++ ++g l++gW++ PHU30896.1 120 CLAREIMNILKYEEAKRVERHELLERWRSRFSMANFKPYPLSSSINATIKTLLENYY-RSYTLDMRNGVLYFGWMN 194 *********************************************************.66**************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 214 aa Download sequence |
MENGKASHLP QAADNVDRMR DKEDLNVRPA EPLAVNFALV LHHMHDESAG TQNHRDRLLR 60 MVKSLSPKIV TLVEQESNTN TVQFFPHFLE TLNYYLYVFE SIHVALPRDH KERINVEQHC 120 LAREIMNILK YEEAKRVERH ELLERWRSRF SMANFKPYPL SSSINATIKT LLENYYRSYT 180 LDMRNGVLYF GWMNGDESQF GCFLCLEIVI LPEV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G48150.1 | 1e-87 | GRAS family protein |