PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU30890.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

bHLH

Protein Properties

Length: 899aa MW: 102550 Da PI: 6.3297

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU30890.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	43	8e-14	698	745	2	54
HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++h + Er+RR ++N+++ Lr+++P++ K++ a+i++ A++YI++L PHU30890.1 698 ETKHFATERQRRVHLNDKYKALRSMVPNP-----SKNDRASIVKDAIDYINEL 745 689***********************9.....7*************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 899 aa Download sequence
MPKRVKIGPK TMDCVFIGHA KSSKTCRFLV HKSEHPDINE NTVIESDNAE FFENIYSYKI 60 RHEQSSGGSK QPRDEPSENV HNEENPRRST HQRTSTSFGL NFVIFLLENE PQTFKEAMSS 120 SNSFFWKEAA NSEIDSILNN HTWELVDLPL ENKPLDSKWI FKRKMKADGT IDNYMARLVV 180 KGFKQKEGLD YFDTYSPVIR ITSVGMLIAL AAVYGLEIHQ IEVKIAFLNG ELEEEIYMKQ 240 PGGFVVPRKE NKVCKLIKSL YELKQAPKYW HTKFDQTMLL NGFKINECNK YVYIKDTPNH 300 QVIVCLYVDD ILIISRDISD INATKQMFES KFGMKDLGVA DVILGIRIHR TTQGLTLSQS 360 HYIENILDKF KYMEFGIAKT PLDVSFALRK NKGESDSQLE YARVLGCLMS TKVLQQKTKK 420 MYVEESGCFD AATHHVQNDG VLAEDVFAIQ EQHTYHHNPS QQDVAAAAAA ALEIEFQQQL 480 NLEMEECYNN THNNNMQDQL IHDQQNNNNN NNSNQGLSCD QSNWGEMNFP PYQNQEDSNN 540 INNHNNFQQQ NFPIPMSDAP YLTTPDLLNM FPLPRCSQSS LLPQKSPNLL TSLELIGDID 600 GGASTSNAVY DPSLVLPLNL PPQPPLLREL FHSFPHGYGL RNLRSNNNTS FFNGMEERDQ 660 VNGALYQDNG EGRPFDNGIF EFSADMNDIA KNRDGIKETK HFATERQRRV HLNDKYKALR 720 SMVPNPSKND RASIVKDAID YINELKRGVN ELKLMVEKKR CSKDRIKRQK KEDGTSLDGL 780 DAKQMDEVEQ SYNGNSLRSS WLQRRSKNTE VDVRIVDDEV TVKLVQQKRI NCLLFASKVL 840 DELQLDLHHV AGGLIGDYYS FLFNSKISEG STVYASAIAK KLIEVVDIQY AAIAPANSY

Sequence ? help Back to Top

Protein Sequence Length: 899 aa Download sequence

MPKRVKIGPK TMDCVFIGHA KSSKTCRFLV HKSEHPDINE NTVIESDNAE FFENIYSYKI  60
RHEQSSGGSK QPRDEPSENV HNEENPRRST HQRTSTSFGL NFVIFLLENE PQTFKEAMSS  120
SNSFFWKEAA NSEIDSILNN HTWELVDLPL ENKPLDSKWI FKRKMKADGT IDNYMARLVV  180
KGFKQKEGLD YFDTYSPVIR ITSVGMLIAL AAVYGLEIHQ IEVKIAFLNG ELEEEIYMKQ  240
PGGFVVPRKE NKVCKLIKSL YELKQAPKYW HTKFDQTMLL NGFKINECNK YVYIKDTPNH  300
QVIVCLYVDD ILIISRDISD INATKQMFES KFGMKDLGVA DVILGIRIHR TTQGLTLSQS  360
HYIENILDKF KYMEFGIAKT PLDVSFALRK NKGESDSQLE YARVLGCLMS TKVLQQKTKK  420
MYVEESGCFD AATHHVQNDG VLAEDVFAIQ EQHTYHHNPS QQDVAAAAAA ALEIEFQQQL  480
NLEMEECYNN THNNNMQDQL IHDQQNNNNN NNSNQGLSCD QSNWGEMNFP PYQNQEDSNN  540
INNHNNFQQQ NFPIPMSDAP YLTTPDLLNM FPLPRCSQSS LLPQKSPNLL TSLELIGDID  600
GGASTSNAVY DPSLVLPLNL PPQPPLLREL FHSFPHGYGL RNLRSNNNTS FFNGMEERDQ  660
VNGALYQDNG EGRPFDNGIF EFSADMNDIA KNRDGIKETK HFATERQRRV HLNDKYKALR  720
SMVPNPSKND RASIVKDAID YINELKRGVN ELKLMVEKKR CSKDRIKRQK KEDGTSLDGL  780
DAKQMDEVEQ SYNGNSLRSS WLQRRSKNTE VDVRIVDDEV TVKLVQQKRI NCLLFASKVL  840
DELQLDLHHV AGGLIGDYYS FLFNSKISEG STVYASAIAK KLIEVVDIQY AAIAPANSY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G31210.1	2e-79	bHLH family protein