PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU30758.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 356aa    MW: 40065 Da    PI: 5.0206
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU30758.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP255.91.1e-1758106355
         AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                 + GVr+++ +gr++AeIrdp++   + r++lg+f+ta+eAa a+++a+++++g
  PHU30758.1  58 FLGVRRRP-WGRYAAEIRDPTT---KERHWLGTFDTAQEAALAYDRAALSMKG 106
                 56******.**********965...5************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 356 aa     Download sequence    
MSSSSSTPIS SDNNNQLPFG MFEPIRTPTG YSWLQRNTAI CQSSEKRGRR KQAEPGRFLG  60
VRRRPWGRYA AEIRDPTTKE RHWLGTFDTA QEAALAYDRA ALSMKGTQAR TNFIYTSDSA  120
NTNFPSLISP FDHVQNMLQP NLSHFNFNTT QSNNNIIKNK NIVMTTATTT TTTTSDHSNE  180
SSSYGSSPNE NSSFFVNNNN NNNNSGYLLD CIVPDSCLKP PPPPSSTPRS KMIRTLQENN  240
DNHQNITTFY GANAMDPEKF SFNKYGYLDE EKYMSSTWES SCELSAMMTN NNIGNMNQML  300
DDVGNCYYPN MENAVFDNSN INNDELMMMP TETPTTTSSS VYQPFGDVEF GYTTLF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G18560.14e-47ERF family protein