PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU30753.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

MYB_related

Protein Properties

Length: 1141aa MW: 127940 Da PI: 8.432

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU30753.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	27.8	5.8e-09	48	83	3	40
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqc 40 W++e+ ++++a +++G++ Wk++a+t+ Rt++++ PHU30753.1 48 QWSEEDLTRFYQAYRKYGKD-WKKVASTVK-FRTAEMV 83 6***************99.****9.*9876 PP

Sequence ? help Back to Top
Protein Sequence Length: 1141 aa Download sequence
MAPAKKSKSI NKRLSPTTEI SPSKDGNGDN GKKSLQRKRK LSDMLGPQWS EEDLTRFYQA 60 YRKYGKDWKK VASTVKFRTA EMVEALYTMN RAYLSLPEGT ASVAGLIAMM TDHYCNLAAS 120 DSEQESNEDA GTSRKPQKRA WGKVHPNISK TSEMTSSALA ASHGCLTLLK KKRSGGSRPR 180 AVGKRTPRFP VSFSYENPKG EKYFSPSGQS LKVQPHDTDD DVKIALVLTE ASQRGGSPQF 240 SKTPSRWTDG AMFSPIGTAE RKRVKVDMGN AKLLSNEVDE EEGSMEADTG ELMRYKNDFE 300 EAETVGRTTQ KQKRAYGKKL EVDDSGENHF DDIKEACSGT EEGQRLGAAR GKLEMEATDE 360 KNARASLQGP RKRSKKVLFG RDESSSFDAL QTLADLSLMM PAAENEDESM MQVKDEIDDH 420 FDESGSLEAV PAHKQRDKRG SAGVKSRWSQ SLSKFEVTSS RTSKHGKVTS SDVNAVPETK 480 QARRAQKAMS SKARKAEGHV DYDVTESQEA AVKDASKKST SKGKRSYQCV SPKLIKDQEH 540 SSCADPRTER SDSAQSTAQI PVENQVNLPT KVRSRRKMDL KKPQKQKDLK IPDKSLDDTS 600 ASFTALRDKA FSLKKKISSC LSNHQVRRWC MYEWFYSAID YPWFAKREFV EYLYHVGLGH 660 VPRLTRVEWG VIRSSLGKPR RFSEQFLNEE KEKLNQYRES VRSHYTELRE GTREGLPTDL 720 ARPLSVGQLV IAIHPKTREI HDGNVLTVDH SRCRVQFDRP ELGVEFVMDI DCMPLNPFEN 780 MPTLLTRHAD AVDKFFESFN ELKMNARANE FMKFPAGDST ENGDVSSHFS PPSPPVSNLL 840 KQTKVASAEA DMQSKSGVME TTVYQQIAYS KPSTVAQIQA KEADVQALAE LTRALDKKDA 900 VVLELSLMND DVLENQKSDD CFLKDSEPFK KQYAAVLIQL NEVNEQVSSA LYRLRQRNTY 960 HGSIPLAWQR PVPNFADPSI LSTFDRCMSQ PQESGFLVNE IIESSKIKSW TMVDAAVQAM 1020 LSYTGRDNTT EKIEEAIDYV NDRIPLDDSC MPIPPDLKSK NVSDRRNEAE IPSELITKCV 1080 ATLLMIQKCT ERQFPPADMA KVLDSAVASL QPCCSQNFPV YAEIQKCMGI IRNQIMALIP 1140 T

Sequence ? help Back to Top

Protein Sequence Length: 1141 aa Download sequence

MAPAKKSKSI NKRLSPTTEI SPSKDGNGDN GKKSLQRKRK LSDMLGPQWS EEDLTRFYQA  60
YRKYGKDWKK VASTVKFRTA EMVEALYTMN RAYLSLPEGT ASVAGLIAMM TDHYCNLAAS  120
DSEQESNEDA GTSRKPQKRA WGKVHPNISK TSEMTSSALA ASHGCLTLLK KKRSGGSRPR  180
AVGKRTPRFP VSFSYENPKG EKYFSPSGQS LKVQPHDTDD DVKIALVLTE ASQRGGSPQF  240
SKTPSRWTDG AMFSPIGTAE RKRVKVDMGN AKLLSNEVDE EEGSMEADTG ELMRYKNDFE  300
EAETVGRTTQ KQKRAYGKKL EVDDSGENHF DDIKEACSGT EEGQRLGAAR GKLEMEATDE  360
KNARASLQGP RKRSKKVLFG RDESSSFDAL QTLADLSLMM PAAENEDESM MQVKDEIDDH  420
FDESGSLEAV PAHKQRDKRG SAGVKSRWSQ SLSKFEVTSS RTSKHGKVTS SDVNAVPETK  480
QARRAQKAMS SKARKAEGHV DYDVTESQEA AVKDASKKST SKGKRSYQCV SPKLIKDQEH  540
SSCADPRTER SDSAQSTAQI PVENQVNLPT KVRSRRKMDL KKPQKQKDLK IPDKSLDDTS  600
ASFTALRDKA FSLKKKISSC LSNHQVRRWC MYEWFYSAID YPWFAKREFV EYLYHVGLGH  660
VPRLTRVEWG VIRSSLGKPR RFSEQFLNEE KEKLNQYRES VRSHYTELRE GTREGLPTDL  720
ARPLSVGQLV IAIHPKTREI HDGNVLTVDH SRCRVQFDRP ELGVEFVMDI DCMPLNPFEN  780
MPTLLTRHAD AVDKFFESFN ELKMNARANE FMKFPAGDST ENGDVSSHFS PPSPPVSNLL  840
KQTKVASAEA DMQSKSGVME TTVYQQIAYS KPSTVAQIQA KEADVQALAE LTRALDKKDA  900
VVLELSLMND DVLENQKSDD CFLKDSEPFK KQYAAVLIQL NEVNEQVSSA LYRLRQRNTY  960
HGSIPLAWQR PVPNFADPSI LSTFDRCMSQ PQESGFLVNE IIESSKIKSW TMVDAAVQAM  1020
LSYTGRDNTT EKIEEAIDYV NDRIPLDDSC MPIPPDLKSK NVSDRRNEAE IPSELITKCV  1080
ATLLMIQKCT ERQFPPADMA KVLDSAVASL QPCCSQNFPV YAEIQKCMGI IRNQIMALIP  1140
T

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G21430.2	0.0	MYB_related family protein