PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU30559.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family WRKY
Protein Properties Length: 244aa    MW: 27048.2 Da    PI: 5.8884
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU30559.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY94.95.8e-3060118259
                 --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                 +D ++WrKYGqK++kgs++pr+YYrC+s+ gC++kk+ver+++d ++++itY+++Hnh+
  PHU30559.1  60 SDCWSWRKYGQKPIKGSPYPRGYYRCSSSkGCSAKKQVERCSKDASLFIITYTSSHNHP 118
                 699************************998****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 244 aa     Download sequence    
MGRSKSLKSQ SKTSRLIQPQ FVASKKSSEC PDIRKIGQKV MFKVQMEGKA IKQKNEGPPS  60
DCWSWRKYGQ KPIKGSPYPR GYYRCSSSKG CSAKKQVERC SKDASLFIIT YTSSHNHPGP  120
NLPNNKDTVT QDSTATLPQQ DQEPAVDKDV PLKDNGDSST TTTTTAATSI SQGIPEENLF  180
TDSFLGTISY DDFLPLSYPQ LMEFPKSEFS EENDFYDELG ELQLPPSSTS FAGIFEEAIL  240
VDPS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G29280.15e-33WRKY family protein