PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU30384.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

MYB_related

Protein Properties

Length: 449aa MW: 50218 Da PI: 9.781

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU30384.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	26	2.2e-08	130	172	3	46
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +WT+eE ++l d++k++ + + Ia +++ +Rt +++k+r+++ PHU30384.1 130 SWTKEETDQLFDLCKRFDLR-FVIIADRFPSNRTVEELKDRYYS 172 7*****************.*******************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 449 aa Download sequence
MDAKDILGLP KNGPLMSQEK KSRPQKESQR KPDGISREVY ALTGGIPPLM PSLDINQLKR 60 RALSESEKIT WQWLPFTSSA RKDNLQLYHW VRVVNGVPPT GDYSFAKYNK SVDVLEYTDE 120 EYEKYLSNPS WTKEETDQLF DLCKRFDLRF VIIADRFPSN RTVEELKDRY YSVSRAITIA 180 RAPSPADVTG HPLVKEPYNV SQEIERKRAL SMVLSQTKLQ ERRDAEVLAE AKKISESRKA 240 AKAAEEAELP DVSDAAPEGA EKAAGIDVIS TSPNAQLPSG IAVPPVSETA STLASLRMLR 300 VYLRTYALEQ MVQAASSSAG LRTIKRVEQT LQDLGVNLKP KVPTKLVCAE HLELRKEILT 360 LLNLQKQVQY KEAEGSSYRE GSYSETPGTP PKRAQRATDL DRTFIPDSTS FGGERAVKRD 420 QKRKGPGRSS EVPSSPAQSK RPRKLKTDG

Sequence ? help Back to Top

Protein Sequence Length: 449 aa Download sequence

MDAKDILGLP KNGPLMSQEK KSRPQKESQR KPDGISREVY ALTGGIPPLM PSLDINQLKR  60
RALSESEKIT WQWLPFTSSA RKDNLQLYHW VRVVNGVPPT GDYSFAKYNK SVDVLEYTDE  120
EYEKYLSNPS WTKEETDQLF DLCKRFDLRF VIIADRFPSN RTVEELKDRY YSVSRAITIA  180
RAPSPADVTG HPLVKEPYNV SQEIERKRAL SMVLSQTKLQ ERRDAEVLAE AKKISESRKA  240
AKAAEEAELP DVSDAAPEGA EKAAGIDVIS TSPNAQLPSG IAVPPVSETA STLASLRMLR  300
VYLRTYALEQ MVQAASSSAG LRTIKRVEQT LQDLGVNLKP KVPTKLVCAE HLELRKEILT  360
LLNLQKQVQY KEAEGSSYRE GSYSETPGTP PKRAQRATDL DRTFIPDSTS FGGERAVKRD  420
QKRKGPGRSS EVPSSPAQSK RPRKLKTDG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	417	423	VKRDQKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G47210.1	0.0	MYB_related family protein