PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU30292.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family C3H
Protein Properties Length: 732aa    MW: 79025.4 Da    PI: 6.4477
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU30292.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH21.54.1e-07309329526
                 --SGGGGTS--TTTTT-SS-SS CS
     zf-CCCH   5 lCrffartGtCkyGdrCkFaHg 26 
                 +C+ f++ G C++Gd C +aHg
  PHU30292.1 309 PCPEFRK-GACRRGDMCEYAHG 329
                 8******.*************9 PP

Sequence ? help Back to Top
Protein Sequence    Length: 732 aa     Download sequence    
MCTGPERPNS SASTNQSVTD STSSMKGMTK LTVETEDSFS SLLELAANND LEGFKRSVEL  60
DASAIDEVGL WLVRKKGAKQ IVNEERTPLM VAATYGSLDV LKLIISNPVV DINRACGPNK  120
CTALHCATSG GSVNAVDAVK LLLSAGADPN VEDANGQRPA DVIVVPPKLL GARASLEELL  180
LNSSSDGSIG DCKLRVSVAT SNASSPILSS SPENGSPCSP ADSLSSPLAL KFDDIPANSA  240
PEKKEYPIDP SLPDIKNSIY STDEFRMFSF KVRPCSRAYS HDWTECPFVH PGENARRRDP  300
RKYHYSCVPC PEFRKGACRR GDMCEYAHGV FECWLHPAQY RTRLCKDGTS CARRVCFFAH  360
TTEELRPLYV STGSAVPSPR SAASAASVMD MAAALNLFPG SPSAHTMMSP SAFNQPMSPT  420
ANGMSHSSGP WPQPNVPTLH LPGSNLQSSR LRSSLSARDI PPDDFNMLQD FDAQQLVLND  480
MACYSQPRPN SASLNRSGRS KTLTPSNLDE LFSAEMNSSP RYSDQAPASG VFSPSHKSAY  540
FNQFQQQQNM LSPINTNVFS PKNIEHPLLQ ASFGVSSPGR MSPRSMEPIS PMSARLSAFA  600
QREKQQQQLR SLSSRDLGSN NASIVGSPVG NSWSNWGSPS GKVDWSVNGS GLGNLRRSSS  660
FEQLNNGEEP DLSWVQSLVK ESPTEMKEKQ AAPNSSAAPS SESLKNSSQI DSVDHSVLGA  720
WLEQMQLDQL VA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G41900.10.0C3H family protein