PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHU30178.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | HB-other | ||||||||
Protein Properties | Length: 205aa MW: 22968.8 Da PI: 10.3143 | ||||||||
Description | HB-other family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 38.1 | 2.7e-12 | 48 | 96 | 3 | 51 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNr 51 kR ++ + +++L + F++n+yp+++++++L k+lg+t qV+ WF N PHU30178.1 48 KRKAYGEVNTKRLYKSFKENNYPDRDAKKKLVKELGITAYQVTKWFENA 96 789999999***************************************6 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 205 aa Download sequence |
MASPSSTRVD IKYQRGKQKG NGHTSDSGLS EKLKVGGMST SKSRSSGKRK AYGEVNTKRL 60 YKSFKENNYP DRDAKKKLVK ELGITAYQVT KWFENAHHCQ RHSSRWDIIM SQKVFKESPS 120 SSKMIGESLG TESKRNMNDA SCNGVEKLEL PKRCSNGEKW HEVDMSEGDV LIQNTSRKES 180 GKPAAEVDMK NQGSDVTPCN RTSKK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G19510.1 | 1e-08 | HB-PHD family protein |