PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHU29979.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | CAMTA | ||||||||
Protein Properties | Length: 170aa MW: 20016 Da PI: 8.5837 | ||||||||
Description | CAMTA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | CG-1 | 98.2 | 6.7e-31 | 71 | 164 | 3 | 96 |
CG-1 3 ke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqr 96 ke + wl++ ei++i+ n++++ t+ ++ +p+ gsl+Ly+rk v++frk G++w+kkkdgktv ++ +k+ + ++vl+cyYah +en++fq PHU29979.1 71 KEaYHCWLRPPEICDIFRNHQNFYSTQRPPLKPPGGSLFLYDRKLVQHFRKNGHNWRKKKDGKTVDDANQKVE-DDIDVLHCYYAHRKENKNFQE 164 454799*************************************************************999875.67*****************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 170 aa Download sequence |
MEDVKVDLNN ICLDKEDSML KADAIQCLFF ITDHVKKGLF WGLRKGCRGG DFVRLFLSSH 60 LIGAYFEQIL KEAYHCWLRP PEICDIFRNH QNFYSTQRPP LKPPGGSLFL YDRKLVQHFR 120 KNGHNWRKKK DGKTVDDANQ KVEDDIDVLH CYYAHRKENK NFQEAKLLDA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G64220.2 | 3e-43 | CAMTA family protein |