PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU29739.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

CAMTA

Protein Properties

Length: 922aa MW: 104517 Da PI: 7.6629

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU29739.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	165.7	7.6e-52	30	146	3	118
CG-1 3 ke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqrrcyw 100 +e k rwl+++ei+aiL n++ +++ ++ + p+sg+++L++rk++r+frkDG++wkkkkdgktv+E+he+LKvg+ e +++yYah+e++ptf rrcyw PHU29739.1 30 EEaKMRWLRPNEIHAILCNYKYFNIFVKPVNLPTSGTIVLFDRKMLRNFRKDGHNWKKKKDGKTVKEAHEHLKVGNEERIHVYYAHGEDQPTFVRRCYW 128 45599******************************************************************************************** PP CG-1 101 lLeeelekivlvhylevk 118 lL+++le+ivlvhy+e++ PHU29739.1 129 LLDKSLEHIVLVHYRETQ 146 *************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 922 aa Download sequence
MESSRAGQLI GKDIHGFRTL QDLDIPSIME EAKMRWLRPN EIHAILCNYK YFNIFVKPVN 60 LPTSGTIVLF DRKMLRNFRK DGHNWKKKKD GKTVKEAHEH LKVGNEERIH VYYAHGEDQP 120 TFVRRCYWLL DKSLEHIVLV HYRETQETRG SPATSVAPAT PVNSSSSSDP SDPSGWVLSE 180 ESNSVDEQAY GASQHAHLGT NRDMTVKTHE QRLLEINTLD WDELLAPNDP NKLMATQEAG 240 GRALVGQQNQ CEVNGYSLND GSLSASRVPI ASLESLVGQV AGSDTVNVNP SNDMPFRSGD 300 GQMTSNFEKN ESGVMTVGAG DSFDNLNKDG LQTQDSFGRW INYFISDSPG SADEMMTPES 360 SVTIDQSYVM QQIFNITEIS PPWALSSEET KILVIGHFPG RQSELAKSNL VCVCADVCFP 420 AEFVQCGVYR CVISPQAPGL VNLYLSFDGS TPISQVMPFE FRAPSAHKWT APLEDQSNWD 480 EFRFQMRLAH LLFSTSKSLS IFSSKVHQDS LKDAKRFVRK CAHITDNWEY LIKSIENRKV 540 PFIHAKDCLF ELSLQTKFHE WLLERVIEGC KKSERDEQGQ GVIHLCAILG YTWAVYPFTW 600 SGLSLDYRDK YGWTALHWAA HYGREKMVAT LLSAGAKPNL VTDPNSENPD GSTAADLASK 660 NGFEGLGAYL AEKALVAHFK DMTLAGNVSG SLQTATEPIN PGNFTEEDLY LKDTLAAYRT 720 AADAAARIQA AFREHSFKVQ TKAVESSNPE IEARNIVAAM KIQHAFRNYE SRKKLAAAAR 780 IQYRFRTWKM RKEFLTMRRH AIRIQAVFRG FQVRRQYRKI IWSVGVLEKA VLRWRLKRKG 840 FRGLQVQSSE AVDNIKPDAD VEEDFFRASR KQAEERVERS VVRVQAMFRS KRAQEEYRRM 900 KLEHNNATLE YERLFNPDIQ IV

Sequence ? help Back to Top

Protein Sequence Length: 922 aa Download sequence

MESSRAGQLI GKDIHGFRTL QDLDIPSIME EAKMRWLRPN EIHAILCNYK YFNIFVKPVN  60
LPTSGTIVLF DRKMLRNFRK DGHNWKKKKD GKTVKEAHEH LKVGNEERIH VYYAHGEDQP  120
TFVRRCYWLL DKSLEHIVLV HYRETQETRG SPATSVAPAT PVNSSSSSDP SDPSGWVLSE  180
ESNSVDEQAY GASQHAHLGT NRDMTVKTHE QRLLEINTLD WDELLAPNDP NKLMATQEAG  240
GRALVGQQNQ CEVNGYSLND GSLSASRVPI ASLESLVGQV AGSDTVNVNP SNDMPFRSGD  300
GQMTSNFEKN ESGVMTVGAG DSFDNLNKDG LQTQDSFGRW INYFISDSPG SADEMMTPES  360
SVTIDQSYVM QQIFNITEIS PPWALSSEET KILVIGHFPG RQSELAKSNL VCVCADVCFP  420
AEFVQCGVYR CVISPQAPGL VNLYLSFDGS TPISQVMPFE FRAPSAHKWT APLEDQSNWD  480
EFRFQMRLAH LLFSTSKSLS IFSSKVHQDS LKDAKRFVRK CAHITDNWEY LIKSIENRKV  540
PFIHAKDCLF ELSLQTKFHE WLLERVIEGC KKSERDEQGQ GVIHLCAILG YTWAVYPFTW  600
SGLSLDYRDK YGWTALHWAA HYGREKMVAT LLSAGAKPNL VTDPNSENPD GSTAADLASK  660
NGFEGLGAYL AEKALVAHFK DMTLAGNVSG SLQTATEPIN PGNFTEEDLY LKDTLAAYRT  720
AADAAARIQA AFREHSFKVQ TKAVESSNPE IEARNIVAAM KIQHAFRNYE SRKKLAAAAR  780
IQYRFRTWKM RKEFLTMRRH AIRIQAVFRG FQVRRQYRKI IWSVGVLEKA VLRWRLKRKG  840
FRGLQVQSSE AVDNIKPDAD VEEDFFRASR KQAEERVERS VVRVQAMFRS KRAQEEYRRM  900
KLEHNNATLE YERLFNPDIQ IV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G16150.1	0.0	CAMTA family protein