PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | PHU29096.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
|
||||||||
Family | Trihelix | ||||||||
Protein Properties | Length: 316aa MW: 36658 Da PI: 4.8989 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 31.8 | 3.6e-10 | 17 | 84 | 2 | 69 |
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegek 69 Wt +e l+L++ r+++ + +++ + ++W++ + + ++g++rs +qCk++we++ +y k+k +e PHU29096.1 17 WTLHESLTLVNEMRSTQIECGNTLASFQKWQSTVQSCNSQGVNRSLNQCKKRWESMLEQYNKVKPWEM 84 ****************************************************************9985 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 316 aa Download sequence |
MEKTSGLRTR SQAAPDWTLH ESLTLVNEMR STQIECGNTL ASFQKWQSTV QSCNSQGVNR 60 SLNQCKKRWE SMLEQYNKVK PWEMAYWSDF DEERKRELEL PEEFDCELFK GIESYLSCLE 120 GEDGAGADTD PDTDPEAQQV PGNNAFFEIG PKRRRRRTKT KRYKMEERLN PWRHILNENR 180 KYEQSKMGIK HEGSIDTNLE APSHETSRLE MKRETSSLEE KAELPILSMV SEVKVEQTNI 240 DNPEEMMAAT LRENAEMITA IIEGNPMDDR DCRPADFKNF EDGRVRLIRS QGNQLIDCLG 300 KISDTLSQFY DAIHKK |
Nucleic Localization Signal ? help Back to Top | |||
---|---|---|---|
No. | Start | End | Sequence |
1 | 152 | 157 | KRRRRR |
2 | 153 | 158 | RRRRRT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G31270.1 | 2e-28 | Trihelix family protein |