PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU28713.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family MYB_related
Protein Properties Length: 328aa    MW: 36100.2 Da    PI: 9.7975
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU28713.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding22.13.6e-07269310443
                      S-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHH CS
  Myb_DNA-binding   4 WTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksr 43 
                      W+  Ed+ l++a k ++++   +W+++a+ ++ gR+   c  r
       PHU28713.1 269 WSSGEDLALLNALKTFPKEvamRWEKVAAAVP-GRSKAACMKR 310
                      ********************************.*******987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 328 aa     Download sequence    
MEFLDEDAKP RFLLQSKPLN QSNSDSDTQT RSLTRTGTII SISLSLLFLV LSFFYFSFEP  60
FGSIFLWLSL SLLIGPFAPI SVTAGDIRVG LGPPIHDPVK EDLSDTEDTK KSNRRSNRPI  120
KKNLDFDPVV VDPNPEKITG SGPNSKKING SIGVLEKSNG LVGNLGKSGG GGEGLWSEGD  180
EELLRKMMGK NPVGKPGRWE AIAEGFNGRY KVESVIKKAK ELGEKKVSDE DSYQRFLKDR  240
KAVDKRVEEG GNERDFANVE VKKVVENGWS SGEDLALLNA LKTFPKEVAM RWEKVAAAVP  300
GRSKAACMKR MAVLKKDFRS SKSAITES
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G45420.13e-62MYB_related family protein