PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHU28705.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | ARR-B | ||||||||
Protein Properties | Length: 560aa MW: 62344.1 Da PI: 6.1554 | ||||||||
Description | ARR-B family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 87.1 | 1.6e-27 | 316 | 370 | 1 | 56 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 k +++WtpeLH++Fv+aveqL G+++A+P++il++mkv+gLt+++++SHLQkYR++ PHU28705.1 316 KVKVDWTPELHKKFVQAVEQL-GIDQAIPSRILDVMKVEGLTRHNIASHLQKYRMH 370 5689*****************.********************************96 PP | |||||||
2 | Myb_DNA-binding | 42.6 | 1.4e-13 | 319 | 368 | 2 | 48 |
SSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 WT+e+++++v+av+qlG + +++I m +g+t+ ++ s++qky+ PHU28705.1 319 VDWTPELHKKFVQAVEQLGIDqaIPSRILDVMKvEGLTRHNIASHLQKYR 368 57***********************************************7 PP | |||||||
3 | Response_reg | 31.3 | 1e-11 | 20 | 126 | 1 | 109 |
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTES CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGak 95 vl+ d++ + + +++ lek +y +v ++ + +eal + k +++ ++ ++ + dG+ l+ +++++ +lp i+ + + +++ +++ +Ga PHU28705.1 20 VLLLDEDSNSAAEMKSRLEKMDY-IVYTFCNESEALSAISSKSegFHVAIVEVSAGDNDGV--LQFLESAK-NLPTIMTSNIHSLSTMMKCIALGAV 112 799999999**************.***************777777************9995..66666666.9*******9999************* PP EEEESS--HHHHHH CS Response_reg 96 dflsKpfdpeelvk 109 +fl Kp + ++l + PHU28705.1 113 EFLQKPLSDDKLKN 126 **********9986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 560 aa Download sequence |
MICIEDELLG WKDFPKGLKV LLLDEDSNSA AEMKSRLEKM DYIVYTFCNE SEALSAISSK 60 SEGFHVAIVE VSAGDNDGVL QFLESAKNLP TIMTSNIHSL STMMKCIALG AVEFLQKPLS 120 DDKLKNIWQH VVHKAFNARK DVSGPLEPVK ESLLSMLQLQ PEKGEPDDKS SNGTEPLIAV 180 ADNNTEQSSG CDKYPAPSTP QLKQGVRSVD DSDCHDHTIF SADQDSGEHD EDIILKEENG 240 SSPHQTMEAD IATFSQINDC ADNSDGSSPH QKTEADIATT SSQSKDCPDN SISHSAEPSK 300 ASGPHSSSGT KSNKKKVKVD WTPELHKKFV QAVEQLGIDQ AIPSRILDVM KVEGLTRHNI 360 ASHLQKYRMH RRQILPREVE RRWPHPQPRD SVQRNYYPHK PVMTFPPYHS NHVAPAGQCY 420 PAWVPPASYP NGLQVWGSPY YPGWQPAETW HWKPHPGLLA DTWGSPVMPP SFGSYPPYPQ 480 NAGMYQSHGM HNRYSMLEKS FDVHPAEEVI DKVVKEAITK PWLPLPLGLK PPSMEGVLDE 540 LSRQGISTVP PRINGSRCWR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G18020.3 | 1e-129 | ARR-B family protein |