PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU28541.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 279aa    MW: 31021.4 Da    PI: 4.8716
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU28541.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.53.8e-19182232255
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                 +y+GVr ++ +g+++AeIrdp +ng  +r++lg++ tae+Aa a+++a+ +++g
  PHU28541.1 182 HYRGVRVRP-WGKFAAEIRDPAKNG--ARVWLGTYETAEDAALAYDKAAFRMRG 232
                 8********.***********9987..*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 279 aa     Download sequence    
MNTNCEVEND FEVLESIRRH LLEDWEAPLM SSDNSTTSEF SRSNSIESNM VANFLSNEFD  60
YSSGTFHDHV FNESGLPNIK LEPQTSIESP EMWYLPEFVA PVTSSENSTT SEFSRSCSIE  120
SEIVDNFFSN EFDYSAGIYH DNTINDYTIP TSLLEVKLES PVATTPPPPP PPAAAAPKPA  180
KHYRGVRVRP WGKFAAEIRD PAKNGARVWL GTYETAEDAA LAYDKAAFRM RGSRALLNFP  240
LRVNSGEPEP VRVGSKRLSA SPEKPSTVSS STKRKKKVA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47220.12e-37ERF family protein