PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHU28443.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | NAC | ||||||||
Protein Properties | Length: 336aa MW: 38815.4 Da PI: 7.6312 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 172.3 | 1.4e-53 | 7 | 136 | 1 | 129 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvkaeek.ewyfFskrdkkyatgkrknratksgyWkatgkdkevlskk 96 +ppGfrFhPtdeelv++yL+kk+++k+++l +vike+d+yk+ePwdL++ ++ +e+ ewyfFs++dkky+tg+r+nratk+g+Wkatg+dk++++ k PHU28443.1 7 VPPGFRFHPTDEELVDYYLRKKIASKRIDL-DVIKEIDLYKIEPWDLQElcRIGSEDPsEWYFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAIYR-K 103 69****************************.9***************954455554446**************************************.9 PP NAM 97 gelvglkktLvfykgrapkgektdWvmheyrle 129 + l+g++ktLvfykgrap+g+k+d +mheyrle PHU28443.1 104 HCLIGMRKTLVFYKGRAPNGQKSDYIMHEYRLE 136 99*****************************85 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 336 aa Download sequence |
MNSFTHVPPG FRFHPTDEEL VDYYLRKKIA SKRIDLDVIK EIDLYKIEPW DLQELCRIGS 60 EDPSEWYFFS HKDKKYPTGT RTNRATKAGF WKATGRDKAI YRKHCLIGMR KTLVFYKGRA 120 PNGQKSDYIM HEYRLETNEN GTQAKGWAVC RVFKKKLATS IRGEGEQYQQ ESLCWYNNEQ 180 LVSNFIPDFD SPRRNNFPNI PYNTTPSYHH QLPYTNMQPH NNDALFLQLP QLESPKIPQS 240 YHGINQINIA QPNSIYNNYD NQAVDQVTDW RVLDKFVASQ LSQQDGTAAA CSSSPASHEQ 300 QMNLLQDDSI NKGTEMASSE IASLSASSSQ LDHLWK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G62700.1 | 1e-123 | NAC family protein |