PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHU28295.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | bHLH | ||||||||
Protein Properties | Length: 250aa MW: 28417 Da PI: 4.8156 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 42.4 | 1.3e-13 | 51 | 95 | 5 | 54 |
HHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 + + Er+RR+++N++++ Lr ++P+ + K++Ka+i + A+eYI++L PHU28295.1 51 NIMSERNRRKKLNERLFALRAVVPNiS------KMDKASIIKDAIEYIQDL 95 5678*********************66......****************99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 250 aa Download sequence |
MENISEDYNN YWETAMFLPL EEFDSCFDEA ISSYYDSSSP EGAQSSMASK NIMSERNRRK 60 KLNERLFALR AVVPNISKMD KASIIKDAIE YIQDLHEQER RIRAEISVLE SGRSKKNSDV 120 EFDQDGSFDL KPKRSKRLEQ QYDYDSSEST TKSSPSSSPI DVLELRVSSM GEKTMVASLT 180 CSKRRDTMIK VCEVFESLNI KIISANITAF SGRLLKIAFI EVDKEESDIL KLRIESAIAS 240 LNDPHSPMSS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G57150.1 | 2e-82 | bHLH family protein |