PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHU28200.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | ERF | ||||||||
Protein Properties | Length: 226aa MW: 25421.3 Da PI: 7.1517 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 35.5 | 2.5e-11 | 119 | 165 | 4 | 54 |
AP2 4 kGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkle 54 G+r++k +gr++AeI dp + k+++lg+f+t e+A +a+ + ++e PHU28200.1 119 VGIRRRK-SGRYFAEISDPI----QhKKVYLGTFDTIEQASQAYFSKKSEFE 165 69**999.7*********82....46******************87776665 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 226 aa Download sequence |
MRGKYNYEST SPISKKRVWL DTFGTAEEAS RVDHHSKKLE FDVMLSHSEQ HGRSEVDASI 60 SNADNVGIDR RIDCHEIGTG EEASRVFNSC LMANVHGAES SDECNITRNC DPKDKIRLVG 120 IRRRKSGRYF AEISDPIQHK KVYLGTFDTI EQASQAYFSK KSEFENLRKG NKDDKPKKNC 180 DQIQQPESPS VVETLNTATS CDPKDKISGQ EKLNGPQIGL FPQVVP |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 117 | 125 | RLVGIRRRK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G68550.1 | 2e-14 | ERF family protein |