PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU28190.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 341aa    MW: 37727.8 Da    PI: 4.8666
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU28190.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.73.4e-19137187155
         AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                 ++++GVr+++ +g+W+AeIrdp     r  r +lg+++taeeAa  +++a+ +l+g
  PHU28190.1 137 KKFRGVRQRP-WGKWAAEIRDPL----RrVRLWLGTYDTAEEAAMVYDHAAIQLRG 187
                 59********.**********72....45*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 341 aa     Download sequence    
MDQHTMLSSG TTVKYTEHRK EITMVKSSAP VSFPGRKRNS EMNVAGPRVV RITVTDADAT  60
DSSSDEAEDG LYSRQRVKKF VNEVRIESSE TGIFRNGLFE NGVLKNGSSS ETAVATTVSR  120
RRKKTTAASK LKVNNGKKFR GVRQRPWGKW AAEIRDPLRR VRLWLGTYDT AEEAAMVYDH  180
AAIQLRGPNA LTNFAVATPA KTSCSGYISG EDSDQRSPKS VLRCASTSFE DSQNNEEAEA  240
ESSIPILPSE HFKSNSDFKG ENDISMSSNF GDFPPFDSIF PDFFQFEDPV PIPDLFDPVV  300
LPDMFVGSST LDFGFGSSSW PEEDYFQDFG DVFGSDPLVA L
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G23750.15e-39ERF family protein