PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU28074.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

AP2

Protein Properties

Length: 1125aa MW: 127309 Da PI: 9.834

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU28074.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	33.3	1.2e-10	45	88	5	52
AP2 5 GVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkk 52 G+r++k +gr+ A I d +k+k ++lg+f+t eeAa+a+ +++ PHU28074.1 45 GIRRRK-SGRYSATITDR---NKHKEVYLGTFDTIEEAAQAYQSKKLE 88 9999.7**9993...456***************9776655 PP
2	AP2	30.1	1.2e-09	168	215	3	54
AP2 3 ykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkle 54 + G+ ++k +gr+ A Ird k+k ++lg+f+t eeA +a+ + ++e PHU28074.1 168 VIGIKRRK-SGRYSATIRD----RaKHKEVYLGTFDTTEEASQAYFSKKSEFE 215 67999888.7*******....4456****************87776666 PP
3	AP2	39.4	1.5e-12	225	273	1	52
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkk 52 +++ GV+ +k +gr++++Ir p ++ kr+++g+f taeeAa+a+ +++ PHU28074.1 225 PHIIGVHKRKATGRYESQIRNP----ISkKRIWVGSFSTAEEAARAYQSKKLE 273 5789***************7....246****************776665 PP
4	AP2	36.1	1.6e-11	354	401	5	56
AP2 5 GVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkklege 56 G+ ++k +gr++AeI dp +r kr +lg+f+t eeA +a+ + ++e+e PHU28074.1 354 GIKRRK-SGRYAAEITDP----IRhKRLWLGTFDTVEEASQAYLSKKFEFENE 401 888888.8*******7....357****************9999999876 PP
5	AP2	32.3	2.4e-10	465	514	3	56
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkklege 56 + G+ ++ +gr+++eI dp +r kr +lg+f+t eeA +a+ + ++e+e PHU28074.1 465 VIGIKRRN-SGRYASEITDP----IRhKRLWLGTFDTVEEASQAYLSKKSEFENE 514 67998776.8*******7....357****************9998888875 PP
6	AP2	35.2	3.1e-11	580	627	5	56
AP2 5 GVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkklege 56 G+ ++k +gr++AeI dp +r k+++lg+f+t eeA +a+ + ++e+e PHU28074.1 580 GIKRRK-SGRYAAEITDP----IRhKKVWLGTFDTVEEASQAYLSKKSEFENE 627 888888.8*******7....357****************9998888875 PP
7	AP2	32.5	2.2e-10	713	757	5	53
AP2 5 GVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkl 53 G+r++k +gr+ A I dp + k+++lg+f+t eeA +a+ + ++ PHU28074.1 713 GIRRRK-SGRYSAKITDPM----KhKQVYLGTFDTIEEASQAYLSKKSEF 757 99999.7******84....35****************8776665 PP
8	AP2	32.3	2.4e-10	833	878	5	54
AP2 5 GVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkle 54 G+ ++k +gr++AeI dp +r k +lg+f+t eeA +a+ + ++e PHU28074.1 833 GIKRRK-SGRYAAEITDP----IRhKCLWLGTFDTVEEASQAYLSKKSEFE 878 888888.8*******7....357****************88776665 PP
9	AP2	34	7.4e-11	914	960	2	51
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaark 51 ++ GV+ +k +gr+ ++I+ p ++ kr++lg+f taeeA +a+ ++ PHU28074.1 914 HIVGVHKRKATGRYTSQIKNP----ISkKRIWLGSFSTAEEASQAYQSKKL 960 789************9997....246***************976665 PP

Sequence ? help Back to Top
Protein Sequence Length: 1125 aa Download sequence
MESSSIAING TSAVVMAERS KKRDGENLKQ PKEPESTKAT RSLIGIRRRK SGRYSATITD 60 RNKHKEVYLG TFDTIEEAAQ AYQSKKLEFQ KIVDANRQCG NEIDVQISNS TNDGAEQRID 120 GQELGIVEED FRVYQSKKQR EFSCLMGKES SDECNITTSC DSNVKRSVIG IKRRKSGRYS 180 ATIRDRAKHK EVYLGTFDTT EEASQAYFSK KSEFEKKYDP HKTTPHIIGV HKRKATGRYE 240 SQIRNPISKK RIWVGSFSTA EEAARAYQSK KLEFQKLVDA KGQCGNENDV QISNSENDGA 300 ERKIDCHETG IVEEDFRVYQ SEEKREFSCL KSKESSDEYD ITTSDSNVKK SLIGIKRRKS 360 GRYAAEITDP IRHKRLWLGT FDTVEEASQA YLSKKFEFEN EKLRQQGNKK NKPIKSFDQI 420 WPESPVVETL DTASMGRRNA RVDSQTSSDE CNTTTHCDPK SKRSVIGIKR RNSGRYASEI 480 TDPIRHKRLW LGTFDTVEEA SQAYLSKKSE FENEKLRQQG NKKNKPIKSF DQIWPESPVV 540 ETLDTASMRR RNARIDSQTS SDECNTTTRC DPKSKRSLIG IKRRKSGRYA AEITDPIRHK 600 KVWLGTFDTV EEASQAYLSK KSEFENEKLR QQGNKKNKPI KSFDQIWPES PVVETLNTAN 660 MGRRSIRIDS QGKEPGSSKA TSGLMTNVRG AESSDECNIT TNGDPKDKIS LIGIRRRKSG 720 RYSAKITDPM KHKQVYLGTF DTIEEASQAY LSKKSEFEKV SQRGEKENKP KRNCDQIQHE 780 SSVMETLNTT SMGRRNARID SQGKELRFSE KTSSDGCNTT TRCDPKSKRS LIGIKRRKSG 840 RYAAEITDPI RHKCLWLGTF DTVEEASQAY LSKKSEFEKL SQGNKEDRSK KKCDQVQQPE 900 SSPVAAASLP VDTHIVGVHK RKATGRYTSQ IKNPISKKRI WLGSFSTAEE ASQAYQSKKL 960 EFQKLVEAKQ QQRANKKQTH SKHDGKSKKL VNVKQEHEND NCELKSAGGS EIKGPISNSS 1020 SGGTDQRINS HETGALEEAF HAYLSKKLDS QSSKEVEVQN NMPTDSSAGK KQDGQEDDKD 1080 ILMGQWIQLP GDREVMFSLK LGLPIIDNYG SLLGEFSSMD DLSIS

Sequence ? help Back to Top

Protein Sequence Length: 1125 aa Download sequence

MESSSIAING TSAVVMAERS KKRDGENLKQ PKEPESTKAT RSLIGIRRRK SGRYSATITD  60
RNKHKEVYLG TFDTIEEAAQ AYQSKKLEFQ KIVDANRQCG NEIDVQISNS TNDGAEQRID  120
GQELGIVEED FRVYQSKKQR EFSCLMGKES SDECNITTSC DSNVKRSVIG IKRRKSGRYS  180
ATIRDRAKHK EVYLGTFDTT EEASQAYFSK KSEFEKKYDP HKTTPHIIGV HKRKATGRYE  240
SQIRNPISKK RIWVGSFSTA EEAARAYQSK KLEFQKLVDA KGQCGNENDV QISNSENDGA  300
ERKIDCHETG IVEEDFRVYQ SEEKREFSCL KSKESSDEYD ITTSDSNVKK SLIGIKRRKS  360
GRYAAEITDP IRHKRLWLGT FDTVEEASQA YLSKKFEFEN EKLRQQGNKK NKPIKSFDQI  420
WPESPVVETL DTASMGRRNA RVDSQTSSDE CNTTTHCDPK SKRSVIGIKR RNSGRYASEI  480
TDPIRHKRLW LGTFDTVEEA SQAYLSKKSE FENEKLRQQG NKKNKPIKSF DQIWPESPVV  540
ETLDTASMRR RNARIDSQTS SDECNTTTRC DPKSKRSLIG IKRRKSGRYA AEITDPIRHK  600
KVWLGTFDTV EEASQAYLSK KSEFENEKLR QQGNKKNKPI KSFDQIWPES PVVETLNTAN  660
MGRRSIRIDS QGKEPGSSKA TSGLMTNVRG AESSDECNIT TNGDPKDKIS LIGIRRRKSG  720
RYSAKITDPM KHKQVYLGTF DTIEEASQAY LSKKSEFEKV SQRGEKENKP KRNCDQIQHE  780
SSVMETLNTT SMGRRNARID SQGKELRFSE KTSSDGCNTT TRCDPKSKRS LIGIKRRKSG  840
RYAAEITDPI RHKCLWLGTF DTVEEASQAY LSKKSEFEKL SQGNKEDRSK KKCDQVQQPE  900
SSPVAAASLP VDTHIVGVHK RKATGRYTSQ IKNPISKKRI WLGSFSTAEE ASQAYQSKKL  960
EFQKLVEAKQ QQRANKKQTH SKHDGKSKKL VNVKQEHEND NCELKSAGGS EIKGPISNSS  1020
SGGTDQRINS HETGALEEAF HAYLSKKLDS QSSKEVEVQN NMPTDSSAGK KQDGQEDDKD  1080
ILMGQWIQLP GDREVMFSLK LGLPIIDNYG SLLGEFSSMD DLSIS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68550.1	3e-14	ERF family protein