PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU28073.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

AP2

Protein Properties

Length: 1190aa MW: 132966 Da PI: 7.1332

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU28073.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	37.2	7.3e-12	127	174	5	56
AP2 5 GVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkklege 56 G+r+ k +gr+ A Ird +rk+++lg+f+t eeA +a+ + +++le+e PHU28073.1 127 GIRRQK-TGRYGAVIRDtI----RRKQVWLGTFDTVEEASQAYFNKKLELENE 174 999877.9*******33....35***********************986 PP
2	AP2	36.5	1.2e-11	279	326	5	56
AP2 5 GVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkklege 56 GVr+ k +gr+ A Ird +rk+++lg+f+t eeA a+ +++le+e PHU28073.1 279 GVRRQK-NGRYGAVIRDtI----RRKQVWLGTFDTVEEASLAYFSKKLELENE 326 9888.8*****33....35**********************9986 PP
3	AP2	29.9	1.4e-09	561	606	5	54
AP2 5 GVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkle 54 G+r+ k +g++ A I d + ++k+++lg+f+t eeA +a+ + ++e PHU28073.1 561 GIRRQK-TGKYGAVITD----KiRHKQIWLGTFDTVEEASQAYFSKKFEFE 606 899777.9*******....4345****************88887776 PP
4	AP2	34.1	6.8e-11	710	757	4	55
AP2 4 kGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 GVr+ k +gr+ A +rd + +rk+++lg+f+t eeA +a+ + +le+ PHU28073.1 710 VGVRRQK-NGRYGAVVRD----KiRRKQIWLGTFDTVEEASQAYFSKKSELEK 757 59888.8*****....5456****************998888876 PP
5	AP2	31.5	4.5e-10	867	913	4	54
AP2 4 kGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkle 54 +G+r+ k +gr+ A I d k+k+++lg+f+t eeA +a+ + +l+ PHU28073.1 867 RGIRRQK-SGRYGAVITD----RiKHKKVWLGTFDTVEEASQAYLSKKSELK 913 9*888.7*****....4446****************88877765 PP
6	AP2	25.5	3.3e-08	976	1013	6	46
AP2 6 VrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaa 46 V+ +k +g++ eIr p ++ kr++lg+f taeeA + + PHU28073.1 976 VHKRKGSGKYTTEIRNP----ISkKRIWLGTFNTAEEASRVY 1013 888999999*****7....246************9977 PP

Sequence ? help Back to Top
Protein Sequence Length: 1190 aa Download sequence
METDEQGLLA DENEEETSCK KQKITQIVVD KVKFTIPLEH TNHKAQTTSV ATERSKETDS 60 KMALFGNEWQ NMGTFLGSEE FKGFSSNMHK FQGKETSCIM SNVHGIESFG ECNTSISSGK 120 GKISLIGIRR QKTGRYGAVI RDTIRRKQVW LGTFDTVEEA SQAYFNKKLE LENEKLNQQG 180 NKEDRPEENC DQIQQPESPV VQCLSMANDQ TSDTACVNRI NSHETTRIVE VHKNKMSGEE 240 PGSSKETACG MASVRGTESS VECNTSTSCN SKGEISLIGV RRQKNGRYGA VIRDTIRRKQ 300 VWLGTFDTVE EASLAYFSKK LELENENLNQ QGNKESKSKE NIDQIQQPES PSVQCLSVGN 360 DQIQPPESPS VQCLSVANDP IQQPESPSLQ CLSVADDQIQ QPESPGAQCL SVANDQIQQP 420 ESHRVRCLSV ANDQIQQPES PGMQCLSVGN DQIQPPESSS VRCLSVANNQ TLDTASVSRI 480 NSHITTTHTL GVHKKNWSGK EQEFSKVTSC LMANVQGTES SNECSTTTSC LPTEKRSLLG 540 IRRQKNGRYG AVITDKRSLL GIRRQKTGKY GAVITDKIRH KQIWLGTFDT VEEASQAYFS 600 KKFEFEKLSQ QDNKDNKPKE NLDQIQQPES SVMQCLSMAI DPTLDTAGVN RINPHETTHI 660 VEVHKNNMSG KEPGSSKETP CLMASVHGTE SSAECNTSTS CNPTGKISLV GVRRQKNGRY 720 GAVVRDKIRR KQIWLGTFDT VEEASQAYFS KKSELEKKKL NQQRNKDNRS KKNGDRIQQP 780 GSPVVLASLS VTDVQAFDTA SVGMRNERID FHKTTHIVGV HKSKTAGKEP ESSKETSCLM 840 DNVHDTESYD EGNTTTSRDP TAKRSLRGIR RQKSGRYGAV ITDRIKHKKV WLGTFDTVEE 900 ASQAYLSKKS ELKKLERQSD KEDKPKKNCD QVQQPESHVV ASFPVANHDQ TLNAARVDRR 960 YKGFDPHETE TRYFRVHKRK GSGKYTTEIR NPISKKRIWL GTFNTAEEAS RVYQSNKLEF 1020 QKLVHAKRQC SNEQTFSKQD GKSEKLVNIK QGHENVDSEL ESAGGSEIVV QVSNSSNGGT 1080 EQRIDSHEIG TCEEAFYGYL SNKFDLQISN KVELQSNMPT DSSAREEKQE GQEDDEDLWM 1140 GEWVQLPGNR AVKFSQKLGL PIIDNYGSLL GEFSTLDDLS ICKTEDGNET

Sequence ? help Back to Top

Protein Sequence Length: 1190 aa Download sequence

METDEQGLLA DENEEETSCK KQKITQIVVD KVKFTIPLEH TNHKAQTTSV ATERSKETDS  60
KMALFGNEWQ NMGTFLGSEE FKGFSSNMHK FQGKETSCIM SNVHGIESFG ECNTSISSGK  120
GKISLIGIRR QKTGRYGAVI RDTIRRKQVW LGTFDTVEEA SQAYFNKKLE LENEKLNQQG  180
NKEDRPEENC DQIQQPESPV VQCLSMANDQ TSDTACVNRI NSHETTRIVE VHKNKMSGEE  240
PGSSKETACG MASVRGTESS VECNTSTSCN SKGEISLIGV RRQKNGRYGA VIRDTIRRKQ  300
VWLGTFDTVE EASLAYFSKK LELENENLNQ QGNKESKSKE NIDQIQQPES PSVQCLSVGN  360
DQIQPPESPS VQCLSVANDP IQQPESPSLQ CLSVADDQIQ QPESPGAQCL SVANDQIQQP  420
ESHRVRCLSV ANDQIQQPES PGMQCLSVGN DQIQPPESSS VRCLSVANNQ TLDTASVSRI  480
NSHITTTHTL GVHKKNWSGK EQEFSKVTSC LMANVQGTES SNECSTTTSC LPTEKRSLLG  540
IRRQKNGRYG AVITDKRSLL GIRRQKTGKY GAVITDKIRH KQIWLGTFDT VEEASQAYFS  600
KKFEFEKLSQ QDNKDNKPKE NLDQIQQPES SVMQCLSMAI DPTLDTAGVN RINPHETTHI  660
VEVHKNNMSG KEPGSSKETP CLMASVHGTE SSAECNTSTS CNPTGKISLV GVRRQKNGRY  720
GAVVRDKIRR KQIWLGTFDT VEEASQAYFS KKSELEKKKL NQQRNKDNRS KKNGDRIQQP  780
GSPVVLASLS VTDVQAFDTA SVGMRNERID FHKTTHIVGV HKSKTAGKEP ESSKETSCLM  840
DNVHDTESYD EGNTTTSRDP TAKRSLRGIR RQKSGRYGAV ITDRIKHKKV WLGTFDTVEE  900
ASQAYLSKKS ELKKLERQSD KEDKPKKNCD QVQQPESHVV ASFPVANHDQ TLNAARVDRR  960
YKGFDPHETE TRYFRVHKRK GSGKYTTEIR NPISKKRIWL GTFNTAEEAS RVYQSNKLEF  1020
QKLVHAKRQC SNEQTFSKQD GKSEKLVNIK QGHENVDSEL ESAGGSEIVV QVSNSSNGGT  1080
EQRIDSHEIG TCEEAFYGYL SNKFDLQISN KVELQSNMPT DSSAREEKQE GQEDDEDLWM  1140
GEWVQLPGNR AVKFSQKLGL PIIDNYGSLL GEFSTLDDLS ICKTEDGNET

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	726	732	DKIRRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68550.1	2e-12	ERF family protein